RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 BTN1A1Q13410 526 aa10.04□□□□□ -0.8
LINC00173-201ENST00000470091 RBPMS2Q6ZRY4 209 aaKnown RBP10.04□□□□□ -0.8
LINC00173-201ENST00000470091 A0A087WWC5 75 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 RBAKDNA6NC62 111 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 F6UB75 175 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 GCGP01275 180 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 ZNF705DP0CH99 300 aaPredicted RBP10.03□□□□□ -0.8
LINC00173-201ENST00000470091 ZNF705BP0CI00 300 aaPredicted RBP10.03□□□□□ -0.8
LINC00173-201ENST00000470091 PAFAH1B2P68402 229 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 PSMG4Q5JS54 123 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 C8orf49Q96NF6 230 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 MLST8Q9BVC4 326 aa10.03□□□□□ -0.8
LINC00173-201ENST00000470091 ALMS1Q8TCU4 4167 aa10.02□□□□□ -0.8
LINC00173-201ENST00000470091 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
LINC00173-201ENST00000470091 H7BYZ3 331 aa10.02□□□□□ -0.81
LINC00173-201ENST00000470091 MT-ND4LP03901 98 aa10.02□□□□□ -0.81
LINC00173-201ENST00000470091 SNRPD3P62318 126 aaKnown RBP10.02□□□□□ -0.81
LINC00173-201ENST00000470091 HIST1H1AQ02539 215 aaPredicted RBP10.02□□□□□ -0.81
LINC00173-201ENST00000470091 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
LINC00173-201ENST00000470091 SMIM12Q96EX1 92 aa10.02□□□□□ -0.81
LINC00173-201ENST00000470091 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
LINC00173-201ENST00000470091 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 TRAV25A0A0B4J276 109 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 NPIPB6E9PJ23 425 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 TMEM78Q5T7P6 136 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 OR8A1Q8NGG7 326 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 OR10G8Q8NGN5 311 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 OR10J6PQ8NGY7 276 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 ZC2HC1AQ96GY0 325 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 OVOL2Q9BRP0 275 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 CTDSP1Q9GZU7 261 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
LINC00173-201ENST00000470091 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 ZFP30Q9Y2G7 519 aa10.01□□□□□ -0.81
LINC00173-201ENST00000470091 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
LINC00173-201ENST00000470091 ZNF138P52744 262 aa10□□□□□ -0.81
LINC00173-201ENST00000470091 ERVFC1-1P60608 527 aa10□□□□□ -0.81
LINC00173-201ENST00000470091 SREK1IP1Q8N9Q2 155 aaPredicted RBP10□□□□□ -0.81
LINC00173-201ENST00000470091 ANAPC16Q96DE5 110 aa10□□□□□ -0.81
LINC00173-201ENST00000470091 SPAG8Q99932 426 aaPredicted RBP10□□□□□ -0.81
LINC00173-201ENST00000470091 NDFIP1Q9BT67 221 aa10□□□□□ -0.81
LINC00173-201ENST00000470091 ZNF492Q9P255 531 aa10□□□□□ -0.81
LINC00173-201ENST00000470091 CXorf65A6NEN9 183 aa9.99□□□□□ -0.81
LINC00173-201ENST00000470091 OR4C46A6NHA9 309 aa9.99□□□□□ -0.81
LINC00173-201ENST00000470091 PPP1R2P9O14990 202 aa9.99□□□□□ -0.81
LINC00173-201ENST00000470091 IBA57Q5T440 356 aaKnown RBP9.99□□□□□ -0.81
LINC00173-201ENST00000470091 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
LINC00173-201ENST00000470091 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
LINC00173-201ENST00000470091 OSTCQ9NRP0 149 aa9.99□□□□□ -0.81
LINC00173-201ENST00000470091 CT45A10P0DMU9 189 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 DEFB131AP59861 70 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 SAPCD1Q5SSQ6 148 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 FAM231DQ6ZW35 169 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 NUDT10Q8NFP7 164 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 NUDT11Q96G61 164 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 MAP6D1Q9H9H5 199 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 URGCP-MRPS24S4R325 110 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 V9GYV3 84 aa9.98□□□□□ -0.81
LINC00173-201ENST00000470091 A0A0J9YX75 114 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 C19orf71A6NCJ1 209 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 GATCO43716 136 aaKnown RBP9.97□□□□□ -0.81
LINC00173-201ENST00000470091 CRIP1P50238 77 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 SMUG1Q53HV7 270 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 FOXI2Q6ZQN5 318 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 TMEM242Q9NWH2 141 aa9.97□□□□□ -0.81
LINC00173-201ENST00000470091 A0A0J9YWU9 116 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 ZNF705GA8MUZ8 300 aaPredicted RBP9.96□□□□□ -0.82
LINC00173-201ENST00000470091 SH2D1AO60880 128 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 LY6G6CO95867 125 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 CA1P00915 261 aaPredicted RBP9.96□□□□□ -0.82
LINC00173-201ENST00000470091 P01737 135 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.82
LINC00173-201ENST00000470091 ZNF124Q15973 351 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 PRR9Q5T870 116 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 EBLN2Q6P2I7 272 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 COX8CQ7Z4L0 72 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 YPEL4Q96NS1 127 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 SAV1Q9H4B6 383 aaPredicted RBP9.96□□□□□ -0.82
LINC00173-201ENST00000470091 RPP21Q9H633 154 aaKnown RBP9.96□□□□□ -0.82
LINC00173-201ENST00000470091 PPP1R14DQ9NXH3 145 aa9.96□□□□□ -0.82
LINC00173-201ENST00000470091 J3KRW8 73 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 SPRY2O43597 315 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
LINC00173-201ENST00000470091 DEFB135Q30KP9 77 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 ODF3L2Q3SX64 289 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 FAM162BQ5T6X4 162 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 DAZAP1Q96EP5 407 aaKnown RBP9.95□□□□□ -0.82
LINC00173-201ENST00000470091 FAM19A4Q96LR4 140 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 IL36BQ9NZH7 164 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
LINC00173-201ENST00000470091 TGIF2-C20orf24A0A0A6YYL0 155 aa9.94□□□□□ -0.82
LINC00173-201ENST00000470091 DUSP14O95147 198 aaKnown RBP9.94□□□□□ -0.82
LINC00173-201ENST00000470091 PFN1P07737 140 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms