RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 IGHV3-16A0A0C4DH30 117 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 NDUFB4O95168 129 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 ZNF846Q147U1 533 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 TMEM183BQ1AE95 376 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 TDRG1Q3Y452 100 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 TMEM183AQ8IXX5 376 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 CHAC1Q9BUX1 264 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 GSKIPQ9P0R6 139 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 ZNF492Q9P255 531 aa12.53□□□□□ -0.4
NCKIPSD-209ENST00000470006 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.41
NCKIPSD-209ENST00000470006 RS1O15537 224 aa12.52□□□□□ -0.41
NCKIPSD-209ENST00000470006 PFN1P07737 140 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-209ENST00000470006 PYYP10082 97 aa12.52□□□□□ -0.41
NCKIPSD-209ENST00000470006 TAS2R30P59541 319 aa12.52□□□□□ -0.41
NCKIPSD-209ENST00000470006 KRTAP10-4P60372 401 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-209ENST00000470006 GPN1Q9HCN4 374 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-209ENST00000470006 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
NCKIPSD-209ENST00000470006 ZNF138P52744 262 aa12.51□□□□□ -0.41
NCKIPSD-209ENST00000470006 PDE6HQ13956 83 aa12.51□□□□□ -0.41
NCKIPSD-209ENST00000470006 PYDC2Q56P42 97 aa12.51□□□□□ -0.41
NCKIPSD-209ENST00000470006 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
NCKIPSD-209ENST00000470006 Q8TAT8 98 aa12.51□□□□□ -0.41
NCKIPSD-209ENST00000470006 TRGV11A0A075B6L2 103 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 L7N2F9 121 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 BCAP31P51572 246 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 VAMP2P63027 116 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 IAH1Q2TAA2 248 aaPredicted RBP12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 CIRBP-AS1Q8TBR5 109 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 BAALCQ8WXS3 180 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 TMEM14CQ9P0S9 112 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
NCKIPSD-209ENST00000470006 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
NCKIPSD-209ENST00000470006 UBE2MP61081 183 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-209ENST00000470006 LAGE3Q14657 143 aa12.49□□□□□ -0.41
NCKIPSD-209ENST00000470006 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-209ENST00000470006 C20orf85Q9H1P6 137 aa12.49□□□□□ -0.41
NCKIPSD-209ENST00000470006 SLC39A9Q9NUM3 307 aa12.49□□□□□ -0.41
NCKIPSD-209ENST00000470006 C7orf66A4D0T2 115 aa12.48□□□□□ -0.41
NCKIPSD-209ENST00000470006 ASAH1Q13510 395 aa12.48□□□□□ -0.41
NCKIPSD-209ENST00000470006 LELP1Q5T871 98 aa12.48□□□□□ -0.41
NCKIPSD-209ENST00000470006 DYNC2LI1Q8TCX1 351 aa12.48□□□□□ -0.41
NCKIPSD-209ENST00000470006 TRAV8-3A0A0A6YYJ7 113 aa12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 M0R2P5 195 aa12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 GATA1P15976 413 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 BAXQ07812 192 aa12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 BAK1Q16611 211 aa12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 TRIM63Q969Q1 353 aa12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 PRADC1Q9BSG0 188 aa12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 UQCC1Q9NVA1 299 aa12.47□□□□□ -0.41
NCKIPSD-209ENST00000470006 CST7O76096 145 aa12.46□□□□□ -0.41
NCKIPSD-209ENST00000470006 RPL37AP61513 92 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-209ENST00000470006 ZNF266Q14584 549 aa12.46□□□□□ -0.41
NCKIPSD-209ENST00000470006 TRBV7-9A0A0J9YWB2 115 aa12.45□□□□□ -0.42
NCKIPSD-209ENST00000470006 UBE2L5PA0A1B0GUS4 154 aa12.45□□□□□ -0.42
NCKIPSD-209ENST00000470006 FBLL1A6NHQ2 334 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-209ENST00000470006 RPL29P47914 159 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-209ENST00000470006 CAV2P51636 162 aa12.45□□□□□ -0.42
NCKIPSD-209ENST00000470006 WDR83OSQ9Y284 106 aa12.45□□□□□ -0.42
NCKIPSD-209ENST00000470006 MBPP02686 304 aaPredicted RBP12.44□□□□□ -0.42
NCKIPSD-209ENST00000470006 CSN1S1P47710 185 aa12.44□□□□□ -0.42
NCKIPSD-209ENST00000470006 Q8N3U1 123 aa12.44□□□□□ -0.42
NCKIPSD-209ENST00000470006 SLC25A29Q8N8R3 303 aa12.44□□□□□ -0.42
NCKIPSD-209ENST00000470006 Q8N976 141 aa12.44□□□□□ -0.42
NCKIPSD-209ENST00000470006 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
NCKIPSD-209ENST00000470006 LSM5Q9Y4Y9 91 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-209ENST00000470006 GNRH2O43555 120 aa12.43□□□□□ -0.42
NCKIPSD-209ENST00000470006 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
NCKIPSD-209ENST00000470006 SMIM18P0DKX4 95 aa12.43□□□□□ -0.42
NCKIPSD-209ENST00000470006 TOR2AQ5JU69 321 aa12.43□□□□□ -0.42
NCKIPSD-209ENST00000470006 ATP6V0E2Q8NHE4 81 aa12.43□□□□□ -0.42
NCKIPSD-209ENST00000470006 FLVCR2Q9UPI3 526 aa12.43□□□□□ -0.42
NCKIPSD-209ENST00000470006 PKHD1L1Q86WI1 4243 aa12.43□□□□□ -0.42
NCKIPSD-209ENST00000470006 IGHV3-73A0A0B4J1V6 119 aa12.42□□□□□ -0.42
NCKIPSD-209ENST00000470006 GGTLC3B5MD39 225 aa12.42□□□□□ -0.42
NCKIPSD-209ENST00000470006 FGF7P21781 194 aa12.42□□□□□ -0.42
NCKIPSD-209ENST00000470006 RHOHQ15669 191 aa12.42□□□□□ -0.42
NCKIPSD-209ENST00000470006 Q6AWC8 147 aa12.42□□□□□ -0.42
NCKIPSD-209ENST00000470006 SLC25A2Q9BXI2 301 aa12.42□□□□□ -0.42
NCKIPSD-209ENST00000470006 COX11Q9Y6N1 276 aa12.42□□□□□ -0.42
NCKIPSD-209ENST00000470006 C5orf51A6NDU8 294 aa12.41□□□□□ -0.42
NCKIPSD-209ENST00000470006 VWC2Q2TAL6 325 aa12.41□□□□□ -0.42
NCKIPSD-209ENST00000470006 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
NCKIPSD-209ENST00000470006 DEDD2Q8WXF8 326 aa12.41□□□□□ -0.42
NCKIPSD-209ENST00000470006 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
NCKIPSD-209ENST00000470006 RNF213Q63HN8 5207 aa12.4□□□□□ -0.42
NCKIPSD-209ENST00000470006 FAM24AA6NFZ4 105 aa12.4□□□□□ -0.42
NCKIPSD-209ENST00000470006 OR10J4P0C629 311 aa12.4□□□□□ -0.42
NCKIPSD-209ENST00000470006 GCSAMLQ5JQS6 135 aa12.4□□□□□ -0.42
NCKIPSD-209ENST00000470006 RMI2Q96E14 147 aa12.4□□□□□ -0.42
NCKIPSD-209ENST00000470006 OR51M1Q9H341 326 aa12.4□□□□□ -0.42
NCKIPSD-209ENST00000470006 IGKV2D-24A0A075B6R9 120 aa12.39□□□□□ -0.43
NCKIPSD-209ENST00000470006 FAM25EA8MYX2 175 aa12.39□□□□□ -0.43
NCKIPSD-209ENST00000470006 HNRNPA3P51991 378 aaKnown RBP12.39□□□□□ -0.43
NCKIPSD-209ENST00000470006 MIR17HGQ75NE6 70 aa12.39□□□□□ -0.43
NCKIPSD-209ENST00000470006 ATP5SQ99766 215 aa12.39□□□□□ -0.43
NCKIPSD-209ENST00000470006 SLIRPQ9GZT3 109 aaKnown RBP12.39□□□□□ -0.43
NCKIPSD-209ENST00000470006 TRBV6-4A0A1B0GX49 114 aa12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 RBAKDNA6NC62 111 aa12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 NDUFB6O95139 128 aa12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 S100A11P31949 105 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms