RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 STOML3Q8TAV4 291 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 BLNKQ8WV28 456 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 AQP10Q96PS8 301 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 ALKBH7Q9BT30 221 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-208ENST00000469585 PAXXQ9BUH6 204 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 OR51M1Q9H341 326 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 SAV1Q9H4B6 383 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-208ENST00000469585 FUT9Q9Y231 359 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 HLA-DRB4X5D2U9 266 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 IGHV3OR16-12A0A075B7B8 117 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 KNCNA6PVL3 124 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 ARPC5O15511 151 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 ZNF253O75346 499 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 INSP01308 110 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 HBE1P02100 147 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 MIFP14174 115 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 CXCL3P19876 107 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 LEPP41159 167 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 PSG3Q16557 428 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 C14orf177Q52M58 125 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 TMEM78Q5T7P6 136 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 TMEM256Q8N2U0 113 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 HSD17B11Q8NBQ5 300 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 OR10G4Q8NGN3 311 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 OR10G9Q8NGN4 311 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 OR10G7Q8NGN6 311 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 OR11H2Q8NH07 326 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 MUC7Q8TAX7 377 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 RPUSD4Q96CM3 377 aaKnown RBP4.53□□□□□ -1.68
PTCD3-208ENST00000469585 OPRPNQ99935 248 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-208ENST00000469585 ATG101Q9BSB4 218 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 NDFIP1Q9BT67 221 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 PSMG3Q9BT73 122 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-208ENST00000469585 ACTR3CQ9C0K3 210 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-208ENST00000469585 TMEM14CQ9P0S9 112 aa4.53□□□□□ -1.68
PTCD3-208ENST00000469585 KLK5Q9Y337 293 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-208ENST00000469585 SMIM9A6NGZ8 99 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 H3BMM0 161 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 CDC34P49427 236 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-208ENST00000469585 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 COX8CQ7Z4L0 72 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 AKAP14Q86UN6 197 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 KRTAP7-1Q8IUC3 87 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 LYPD1Q8N2G4 141 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 OR2G3Q8NGZ4 309 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 MRPL53Q96EL3 112 aaKnown RBP4.52□□□□□ -1.69
PTCD3-208ENST00000469585 NIPSNAP3BQ9BS92 247 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 RNF126Q9BV68 326 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 C11orf1Q9H5F2 150 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 TMEM167BQ9NRX6 74 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 XCL2Q9UBD3 114 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 TRRAPQ9Y4A5 3859 aa4.52□□□□□ -1.69
PTCD3-208ENST00000469585 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 A0A0J9YX75 114 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 NUPR2A6NF83 97 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 F6UZH7 168 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 BOLA2-SMG1P6H3BVE0 249 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 HMGB3O15347 200 aaKnown RBP4.51□□□□□ -1.69
PTCD3-208ENST00000469585 CXorf1O96002 111 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 NBEAP1P0C6P0 100 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 CDKN1BP46527 198 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 PPT1P50897 306 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF345Q14585 488 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 RRN3P1Q2M238 152 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 FAM24BQ8N5W8 94 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 RNF182Q8N6D2 247 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 OR8A1Q8NGG7 326 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 C11orf45Q8TAV5 145 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 TMEM37Q8WXS4 190 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF471Q9BX82 626 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-208ENST00000469585 NKX6-2Q9C056 277 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-208ENST00000469585 RETNQ9HD89 108 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF331Q9NQX6 463 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-208ENST00000469585 TNFSF18Q9UNG2 199 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 RFNGQ9Y644 331 aa4.51□□□□□ -1.69
PTCD3-208ENST00000469585 TRBV19A0A075B6N1 114 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 A0A087WZ39 114 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 SERTM2A0A1B0GWG4 89 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 HMSDA8MTL9 139 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 UMAD1C9J7I0 102 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 C11orf94C9JXX5 98 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 OR10J4P0C629 311 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 TPT1P13693 172 aaKnown RBP4.5□□□□□ -1.69
PTCD3-208ENST00000469585 HTN1P15515 57 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 ATP6V0CP27449 155 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 CNN1P51911 297 aaKnown RBP4.5□□□□□ -1.69
PTCD3-208ENST00000469585 RANP62826 216 aaKnown RBP4.5□□□□□ -1.69
PTCD3-208ENST00000469585 PATE2Q6UY27 113 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 LINC00322Q6ZN03 302 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-208ENST00000469585 HYLS1Q96M11 299 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 LINC00477Q96M19 166 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 LINC00479Q96M42 142 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 LINC01587Q99440 93 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 C20orf144Q9BQM9 153 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 OVOL2Q9BRP0 275 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 C11orf68Q9H3H3 251 aaKnown RBP4.5□□□□□ -1.69
PTCD3-208ENST00000469585 RPH3ALQ9UNE2 315 aa4.5□□□□□ -1.69
PTCD3-208ENST00000469585 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 TRAV5A0A0B4J249 113 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms