RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LELP1Q5T871 98 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 SLC35E3Q7Z769 313 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 OR52R1Q8NGF1 315 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 OR5J2Q8NH18 312 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 OR10J5Q8NHC4 309 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 DCANP1Q8TF63 244 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST1H2BHQ93079 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 LYSMD1Q96S90 227 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST1H2BNQ99877 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST1H2BMQ99879 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 CCDC90BQ9GZT6 254 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 CHST6Q9GZX3 395 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 TAS2R7Q9NYW3 318 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HHLA3Q9XRX5 114 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 ARHGAP32A7KAX9 2087 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 IGLV3-9A0A075B6K5 115 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 A0A1W2PRE2 83 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 RFPL4AA6NLU0 287 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 RFPL4AL1F8VTS6 287 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 TRAPPC2LH3BP13 241 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 ORC5O43913 435 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 HLA-DMBP28068 263 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 FXYD7P58549 80 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 CDC42P60953 191 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 MIAQ16674 131 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 LCA10Q71F78 164 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 C2orf50Q96LR7 162 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 SERPINI1Q99574 410 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 TIMM21Q9BVV7 248 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 RNF122Q9H9V4 155 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 XAGE1AQ9HD64 81 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 TVP23BQ9NYZ1 205 aa1.94□□□□□ -2.1
LSM5-209ENST00000468872 UNC13CQ8NB66 2214 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 TMSB15BA0A087X1C1 80 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 H7C1C5 153 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 J3QQQ9 107 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 IFNA14P01570 189 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 C1QAP02745 245 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 RPS4Y1P22090 263 aaKnown RBP1.93□□□□□ -2.1
LSM5-209ENST00000468872 PSMB8P28062 276 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 CA5AP35218 305 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 PIGPP57054 158 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 RPL26P61254 145 aaKnown RBP1.93□□□□□ -2.1
LSM5-209ENST00000468872 LCN6P62502 163 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 SARNPP82979 210 aaKnown RBP1.93□□□□□ -2.1
LSM5-209ENST00000468872 LTC4SQ16873 150 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 ZNF791Q3KP31 576 aaPredicted RBP1.93□□□□□ -2.1
LSM5-209ENST00000468872 RPL22L1Q6P5R6 122 aaKnown RBP1.93□□□□□ -2.1
LSM5-209ENST00000468872 DCUN1D2Q6PH85 259 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 Q6ZTI0 123 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 KTN1-AS1Q86SY8 53 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 OR51T1Q8NGJ9 327 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 PLEKHB2Q96CS7 222 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 SSR3Q9UNL2 185 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 RPL26L1Q9UNX3 145 aaKnown RBP1.93□□□□□ -2.1
LSM5-209ENST00000468872 DENND4CQ5VZ89 1909 aa1.93□□□□□ -2.1
LSM5-209ENST00000468872 ANK1P16157 1881 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 DOCK10Q96BY6 2186 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 TRAV38-1A0A0B4J264 116 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 IGKV1-9A0A0C4DH69 117 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 A0A0D9SEW6 157 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 A0A1B0GVG6 124 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 MAP1LC3B2A6NCE7 125 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 GGT3PA6NGU5 568 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 NDUFC2O95298 119 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 EVX1P49640 407 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 ERHP84090 104 aaKnown RBP1.92□□□□□ -2.1
LSM5-209ENST00000468872 RPL18Q07020 188 aaKnown RBP1.92□□□□□ -2.1
LSM5-209ENST00000468872 EIF3IQ13347 325 aaKnown RBP1.92□□□□□ -2.1
LSM5-209ENST00000468872 RHEBQ15382 184 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 C6orf52Q5T4I8 152 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 ZNF439Q8NDP4 499 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 OR4C6Q8NH72 309 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 TERB2Q8NHR7 220 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 SPACA4Q8TDM5 124 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 ACOT12Q8WYK0 555 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 ADAT3Q96EY9 351 aaPredicted RBP1.92□□□□□ -2.1
LSM5-209ENST00000468872 GPER1Q99527 375 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 MAP1LC3BQ9GZQ8 125 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 TMEM133Q9H2Q1 129 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 BATF3Q9NR55 127 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 SCN8AQ9UQD0 1980 aa1.92□□□□□ -2.1
LSM5-209ENST00000468872 VPS13DQ5THJ4 4388 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 NCOA6Q14686 2063 aaPredicted RBP1.91□□□□□ -2.1
LSM5-209ENST00000468872 ZNF860A6NHJ4 632 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 TSTD3H0UI37 97 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 J3QRK9 145 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 IFNA10P01566 189 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 IFNA7P01567 189 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 IGHV3-7P01780 117 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 MSNP26038 577 aaKnown RBP1.91□□□□□ -2.1
LSM5-209ENST00000468872 ASIPP42127 132 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 TFF3Q07654 80 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 SURF2Q15527 256 aaPredicted RBP1.91□□□□□ -2.1
LSM5-209ENST00000468872 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 DYNAPQ8N1N2 210 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 FAM24BQ8N5W8 94 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 C12orf29Q8N999 325 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 GRPEL2Q8TAA5 225 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms