RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 FAM210BQ96KR6 192 aa12.96□□□□□ -0.34
RPL39-202ENST00000468844 MLST8Q9BVC4 326 aa12.96□□□□□ -0.34
RPL39-202ENST00000468844 AURKAIP1Q9NWT8 199 aaPredicted RBP12.96□□□□□ -0.34
RPL39-202ENST00000468844 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.34
RPL39-202ENST00000468844 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 ZNF138P52744 262 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 CTAG1AP78358 180 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 EGFEM1PQ0D2K5 195 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 BAGE2Q86Y30 109 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 LINC00477Q96M19 166 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 PRR25Q96S07 402 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BKO60814 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 TRGC2P03986 189 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BJP06899 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BOP23527 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BBP33778 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 CMC4P56277 68 aaPredicted RBP12.94□□□□□ -0.34
RPL39-202ENST00000468844 NDUFA6P56556 154 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BDP58876 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BCP62807 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST2H2BEQ16778 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.94□□□□□ -0.34
RPL39-202ENST00000468844 LINC01551Q86U37 167 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 OR4B1Q8NGF8 309 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 OCC1Q8TAD7 63 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BHQ93079 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BNQ99877 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 HIST1H2BMQ99879 126 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 TRBV24-1A0A075B6N3 115 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 H3BMM0 161 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 K7EN84 100 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 IGKV3-20P01619 116 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 C8orf49Q96NF6 230 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 NIT2Q9NQR4 276 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 ZFP30Q9Y2G7 519 aa12.94□□□□□ -0.34
RPL39-202ENST00000468844 RPL23P62829 140 aaKnown RBP12.93□□□□□ -0.34
RPL39-202ENST00000468844 ADIRFQ15847 76 aa12.93□□□□□ -0.34
RPL39-202ENST00000468844 SAMD5Q5TGI4 173 aa12.93□□□□□ -0.34
RPL39-202ENST00000468844 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
RPL39-202ENST00000468844 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
RPL39-202ENST00000468844 A8MTW9 85 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
RPL39-202ENST00000468844 AMTNQ6UX39 209 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 Q8N1Y9 231 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 DEFB125Q8N687 156 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 SMIM12Q96EX1 92 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 LY96Q9Y6Y9 160 aa12.92□□□□□ -0.34
RPL39-202ENST00000468844 RBMY1BA6NDE4 496 aaKnown RBP12.91□□□□□ -0.34
RPL39-202ENST00000468844 RBMY1EA6NEQ0 496 aaKnown RBP12.91□□□□□ -0.34
RPL39-202ENST00000468844 IFITM10A6NMD0 228 aa12.91□□□□□ -0.34
RPL39-202ENST00000468844 RBMY1DP0C7P1 496 aaKnown RBP12.91□□□□□ -0.34
RPL39-202ENST00000468844 SAPCD1Q5SSQ6 148 aa12.91□□□□□ -0.34
RPL39-202ENST00000468844 NDFIP1Q9BT67 221 aa12.91□□□□□ -0.34
RPL39-202ENST00000468844 PFN1P07737 140 aaKnown RBP12.9□□□□□ -0.34
RPL39-202ENST00000468844 TRGC1P0CF51 173 aa12.9□□□□□ -0.34
RPL39-202ENST00000468844 MGST1P10620 155 aaKnown RBP12.9□□□□□ -0.34
RPL39-202ENST00000468844 OR5I1Q13606 314 aa12.9□□□□□ -0.34
RPL39-202ENST00000468844 KIR3DS1Q14943 382 aa12.9□□□□□ -0.34
RPL39-202ENST00000468844 STHQ8IWL8 128 aa12.9□□□□□ -0.34
RPL39-202ENST00000468844 GSN-AS1Q9NRJ2 163 aa12.9□□□□□ -0.34
RPL39-202ENST00000468844 PHOX2AO14813 284 aa12.9□□□□□ -0.35
RPL39-202ENST00000468844 PRR9Q5T870 116 aa12.9□□□□□ -0.35
RPL39-202ENST00000468844 COX8CQ7Z4L0 72 aa12.9□□□□□ -0.35
RPL39-202ENST00000468844 TRPT1Q86TN4 253 aaKnown RBP12.9□□□□□ -0.35
RPL39-202ENST00000468844 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.35
RPL39-202ENST00000468844 FRZBQ92765 325 aa12.9□□□□□ -0.35
RPL39-202ENST00000468844 ODF3Q96PU9 254 aa12.9□□□□□ -0.35
RPL39-202ENST00000468844 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
RPL39-202ENST00000468844 CRISP2P16562 243 aa12.89□□□□□ -0.35
RPL39-202ENST00000468844 PRR27Q6MZM9 219 aa12.89□□□□□ -0.35
RPL39-202ENST00000468844 LINC00322Q6ZN03 302 aaPredicted RBP12.89□□□□□ -0.35
RPL39-202ENST00000468844 PYGO2Q9BRQ0 406 aa12.89□□□□□ -0.35
RPL39-202ENST00000468844 J3KRW8 73 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 M0R2Z0 102 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 GCGP01275 180 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 ZNF80P51504 273 aaPredicted RBP12.88□□□□□ -0.35
RPL39-202ENST00000468844 S100PP25815 95 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 CRIP1P50238 77 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 SPINK13Q1W4C9 94 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 CLUHP3Q96NS8 147 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 SRD5A3Q9H8P0 318 aa12.88□□□□□ -0.35
RPL39-202ENST00000468844 KLLNB2CW77 178 aa12.87□□□□□ -0.35
RPL39-202ENST00000468844 H7BYZ3 331 aa12.87□□□□□ -0.35
RPL39-202ENST00000468844 PPP1R2P9O14990 202 aa12.87□□□□□ -0.35
RPL39-202ENST00000468844 S100A2P29034 98 aa12.87□□□□□ -0.35
RPL39-202ENST00000468844 CDKN1BP46527 198 aa12.87□□□□□ -0.35
RPL39-202ENST00000468844 ANAPC16Q96DE5 110 aa12.87□□□□□ -0.35
RPL39-202ENST00000468844 GPX1P07203 203 aa12.86□□□□□ -0.35
RPL39-202ENST00000468844 FXYD7P58549 80 aa12.86□□□□□ -0.35
RPL39-202ENST00000468844 Q6ZQT7 251 aa12.86□□□□□ -0.35
RPL39-202ENST00000468844 HIST3H2BBQ8N257 126 aa12.86□□□□□ -0.35
RPL39-202ENST00000468844 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
RPL39-202ENST00000468844 ZMAT5Q9UDW3 170 aaKnown RBP12.86□□□□□ -0.35
RPL39-202ENST00000468844 TRAV12-2A0A075B6T6 113 aa12.86□□□□□ -0.35
RPL39-202ENST00000468844 LINC00587B1AMM8 73 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms