RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ANXA2RQ3ZCQ2 193 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 ZNF767PQ75MW2 155 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 EIF4E3Q8N5X7 224 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 ZNF680Q8NEM1 530 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 FAM213BQ8TBF2 198 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 MBD3L1Q8WWY6 194 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 FAM210BQ96KR6 192 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 NDFIP1Q9BT67 221 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 SNURFLB1AK76 121 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 IGLL5B9A064 214 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 RGS13O14921 159 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 IFNA7P01567 189 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 RAB5CP51148 216 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 GNG5P63218 68 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 SLC51BQ86UW2 128 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 CYB561D1Q8N8Q1 229 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 SFT2D1Q8WV19 159 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 ATG101Q9BSB4 218 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 TMPRSS5Q9H3S3 457 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
TMEM39A-205ENST00000468676 CBY3A6NI87 242 aa10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 FAM74A7A6NL05 159 aa10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 FHITP49789 147 aa10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 DAZ2Q13117 558 aaKnown RBP10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 PRR9Q5T870 116 aa10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 Q6AWC8 147 aa10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 TREM1Q9NP99 234 aa10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
TMEM39A-205ENST00000468676 IGHV1OR15-1A0A075B7D0 117 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 F6UZH7 168 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 H2AFB1P0C5Y9 115 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 PPT1P50897 306 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 UBE2G2P60604 165 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 ZFP69Q49AA0 526 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 HIST1H2BAQ96A08 127 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 LYSTQ99698 3801 aa10.51□□□□□ -0.73
TMEM39A-205ENST00000468676 DYNC2H1Q8NCM8 4307 aaKnown RBP10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 IGHV4-4A0A075B6R2 117 aa10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 FLI1Q01543 452 aaPredicted RBP10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 SAPCD1Q5SSQ6 148 aa10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 IBA57Q5T440 356 aaKnown RBP10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 NDUFAF3Q9BU61 184 aa10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 PSG8Q9UQ74 426 aa10.5□□□□□ -0.73
TMEM39A-205ENST00000468676 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 TEX46H3BTG2 121 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 PEX7O00628 323 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 ATP5G1P05496 136 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 ATP5G3P48201 142 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 CST9LP1Q5W188 147 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 C11orf72Q8NBR9 251 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 TVP23CQ96ET8 276 aa10.49□□□□□ -0.73
TMEM39A-205ENST00000468676 TRAV1-1A0A0B4J248 108 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 IGLV2-11P01706 119 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 HTN3P15516 51 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 SULT1A2P50226 295 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 TCL1AP56279 114 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 TDRG1Q3Y452 100 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 C9orf62Q8N4C0 152 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 SGK494Q96LW2 274 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 GSN-AS1Q9NRJ2 163 aa10.48□□□□□ -0.73
TMEM39A-205ENST00000468676 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 A0A1B0GVG6 124 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 PAGE4O60829 102 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 LY6G6CO95867 125 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 ZNF415Q09FC8 603 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 SMUG1Q53HV7 270 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 Q6ZQT7 251 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 PRNTQ86SH4 94 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 KCNS1Q96KK3 526 aa10.47□□□□□ -0.73
TMEM39A-205ENST00000468676 PLECQ15149 4684 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-205ENST00000468676 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.73
TMEM39A-205ENST00000468676 MUC21Q5SSG8 566 aa10.46□□□□□ -0.73
TMEM39A-205ENST00000468676 FMC1Q96HJ9 113 aa10.46□□□□□ -0.73
TMEM39A-205ENST00000468676 TP53TG3Q9ULZ0 132 aa10.46□□□□□ -0.73
TMEM39A-205ENST00000468676 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
TMEM39A-205ENST00000468676 GAGE12BA1L429 117 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 F5H768 121 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 GAGE7O76087 117 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 GAGE12FP0CL80 117 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 GAGE12GP0CL81 117 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 GAGE12IP0CL82 117 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 LINC00479Q96M42 142 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 C18orf15Q96N68 181 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 SPXQ9BT56 116 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 NAGKQ9UJ70 344 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 ZFP30Q9Y2G7 519 aa10.45□□□□□ -0.74
TMEM39A-205ENST00000468676 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
TMEM39A-205ENST00000468676 TRAV34A0A0B4J273 112 aa10.44□□□□□ -0.74
TMEM39A-205ENST00000468676 TRBV6-1A0A0K0K1D8 114 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms