RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 HIGD1AQ9Y241 93 aa10.75□□□□□ -0.69
COL27A1-203ENST00000468565 MGST1P10620 155 aaKnown RBP10.74□□□□□ -0.69
COL27A1-203ENST00000468565 JOSD1Q15040 202 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-203ENST00000468565 ODF3L2Q3SX64 289 aa10.74□□□□□ -0.69
COL27A1-203ENST00000468565 NBEAL2Q6ZNJ1 2754 aa10.74□□□□□ -0.69
COL27A1-203ENST00000468565 IGHV3-49A0A0A0MS15 119 aa10.74□□□□□ -0.69
COL27A1-203ENST00000468565 M0R143 59 aa10.74□□□□□ -0.69
COL27A1-203ENST00000468565 IGLV2-8P01709 118 aa10.74□□□□□ -0.69
COL27A1-203ENST00000468565 IGLC1P0CG04 106 aa10.74□□□□□ -0.69
COL27A1-203ENST00000468565 RETNQ9HD89 108 aa10.74□□□□□ -0.69
COL27A1-203ENST00000468565 DLEU1O43261 78 aa10.73□□□□□ -0.69
COL27A1-203ENST00000468565 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
COL27A1-203ENST00000468565 CMC4P56277 68 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-203ENST00000468565 TNP2Q05952 138 aa10.73□□□□□ -0.69
COL27A1-203ENST00000468565 IGHV3OR16-13A0A075B7E8 117 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 IGHV3-74A0A0B4J1X5 117 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 A0A1W2PS18 150 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 SLC25A5P05141 298 aaKnown RBP10.72□□□□□ -0.69
COL27A1-203ENST00000468565 NBEAP1P0C6P0 100 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 PSG1P11464 419 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 LYZP61626 148 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 RANP62826 216 aaKnown RBP10.72□□□□□ -0.69
COL27A1-203ENST00000468565 COX19Q49B96 90 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
COL27A1-203ENST00000468565 TCF24Q7RTU0 167 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 BLNKQ8WV28 456 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 RNASE7Q9H1E1 156 aaKnown RBP10.72□□□□□ -0.69
COL27A1-203ENST00000468565 EPDR1Q9UM22 224 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 APOHP02749 345 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-203ENST00000468565 AMBPP02760 352 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 CASC10Q5T4H9 136 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 BAGE2Q86Y30 109 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 OR8I2Q8N0Y5 310 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 METTL26Q96S19 204 aa10.72□□□□□ -0.69
COL27A1-203ENST00000468565 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 PGPA6NDG6 321 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 UBE2G1P62253 170 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 PAFAH1B2P68402 229 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 TMEM183BQ1AE95 376 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 WDR73Q6P4I2 378 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 TMEM18Q96B42 140 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 TMEM14CQ9P0S9 112 aa10.71□□□□□ -0.69
COL27A1-203ENST00000468565 ZNF705GA8MUZ8 300 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-203ENST00000468565 APOC4P55056 127 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 FAM231DQ6ZW35 169 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 C5orf17Q8NAS9 161 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 SVIPQ8NHG7 77 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 SMIM12Q96EX1 92 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 MRPL18Q9H0U6 180 aaKnown RBP10.7□□□□□ -0.7
COL27A1-203ENST00000468565 PRO1933Q9H354 126 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 TMEM238LA0A1B0GVL6 79 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 MT-ND6P03923 174 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 GNB1LQ9BYB4 327 aa10.7□□□□□ -0.7
COL27A1-203ENST00000468565 SLC25A39Q9BZJ4 359 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-203ENST00000468565 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 TRAV34A0A0B4J273 112 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 KIR2DL5BA0A0G2JN68 375 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 KIR2DL5BA0A0G2JPC4 375 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 SMIM27A0A1W2PRY6 76 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 ZNF25P17030 456 aaPredicted RBP10.69□□□□□ -0.7
COL27A1-203ENST00000468565 TFPI2P48307 235 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 GNG5P63218 68 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 S100A7AQ86SG5 101 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 KIR2DL5AQ8N109 375 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 KIR2DL5BQ8NHK3 375 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 ATG101Q9BSB4 218 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 MAP6D1Q9H9H5 199 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 U3KQE9 123 aa10.69□□□□□ -0.7
COL27A1-203ENST00000468565 SNURFLB1AK76 121 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 TOMM40O96008 361 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 HIST1H1EP10412 219 aaKnown RBP10.68□□□□□ -0.7
COL27A1-203ENST00000468565 Q6ZWC4 215 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 GBGT1Q8N5D6 347 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 NHLRC2Q8NBF2 726 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 GRAMD2BQ96HH9 432 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 FMC1Q96HJ9 113 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 MS4A6AQ9H2W1 248 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 Q9H3A6 140 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 OTORQ9NRC9 128 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 TP53TG1Q9Y2A0 90 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 KLF12Q9Y4X4 402 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 SNRPCP09234 159 aaKnown RBP10.68□□□□□ -0.7
COL27A1-203ENST00000468565 LEMD1Q68G75 181 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 RPH3ALQ9UNE2 315 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 STARD9Q9P2P6 4700 aa10.68□□□□□ -0.7
COL27A1-203ENST00000468565 CSMD3Q7Z407 3707 aa10.67□□□□□ -0.7
COL27A1-203ENST00000468565 TCL1AP56279 114 aa10.67□□□□□ -0.7
COL27A1-203ENST00000468565 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
COL27A1-203ENST00000468565 APRG1Q8IVJ8 170 aa10.67□□□□□ -0.7
COL27A1-203ENST00000468565 IL17DQ8TAD2 202 aa10.67□□□□□ -0.7
COL27A1-203ENST00000468565 GPR82Q96P67 336 aa10.67□□□□□ -0.7
COL27A1-203ENST00000468565 SHANK2-AS3Q9BTD1 123 aa10.67□□□□□ -0.7
COL27A1-203ENST00000468565 IL4P05112 153 aa10.66□□□□□ -0.7
COL27A1-203ENST00000468565 CRISP2P16562 243 aa10.66□□□□□ -0.7
COL27A1-203ENST00000468565 G0S2P27469 103 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms