RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ANXA2RQ3ZCQ2 193 aa14.27□□□□□ -0.13
NPHP4-206ENST00000468253 Q8TAT8 98 aa14.27□□□□□ -0.13
NPHP4-206ENST00000468253 FAM213BQ8TBF2 198 aa14.27□□□□□ -0.13
NPHP4-206ENST00000468253 SFT2D1Q8WV19 159 aa14.27□□□□□ -0.13
NPHP4-206ENST00000468253 FAM74A7A6NL05 159 aa14.26□□□□□ -0.13
NPHP4-206ENST00000468253 GNG5P63218 68 aa14.26□□□□□ -0.13
NPHP4-206ENST00000468253 ZFP69Q49AA0 526 aa14.26□□□□□ -0.13
NPHP4-206ENST00000468253 Q6AWC8 147 aa14.26□□□□□ -0.13
NPHP4-206ENST00000468253 EIF4E3Q8N5X7 224 aaKnown RBP14.26□□□□□ -0.13
NPHP4-206ENST00000468253 TCEAL7Q9BRU2 100 aa14.26□□□□□ -0.13
NPHP4-206ENST00000468253 ATG101Q9BSB4 218 aa14.26□□□□□ -0.13
NPHP4-206ENST00000468253 RPH3ALQ9UNE2 315 aa14.26□□□□□ -0.13
NPHP4-206ENST00000468253 DEFB131BA0A096LNP1 70 aa14.25□□□□□ -0.13
NPHP4-206ENST00000468253 LCE6AA0A183 80 aa14.25□□□□□ -0.13
NPHP4-206ENST00000468253 H2AFB1P0C5Y9 115 aa14.25□□□□□ -0.13
NPHP4-206ENST00000468253 PRR9Q5T870 116 aa14.25□□□□□ -0.13
NPHP4-206ENST00000468253 C9orf62Q8N4C0 152 aa14.25□□□□□ -0.13
NPHP4-206ENST00000468253 CYB561D1Q8N8Q1 229 aa14.25□□□□□ -0.13
NPHP4-206ENST00000468253 HIST1H2BAQ96A08 127 aa14.25□□□□□ -0.13
NPHP4-206ENST00000468253 TRAV1-1A0A0B4J248 108 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 IFNA7P01567 189 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 PPT1P50897 306 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 DAD1P61803 113 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 DAZ2Q13117 558 aaKnown RBP14.24□□□□□ -0.13
NPHP4-206ENST00000468253 TMEM75Q8N9X5 138 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 ZNF680Q8NEM1 530 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 TVP23CQ96ET8 276 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 FAM210BQ96KR6 192 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 TREM1Q9NP99 234 aa14.24□□□□□ -0.13
NPHP4-206ENST00000468253 IGHV1OR15-1A0A075B7D0 117 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 TRAV8-1A0A0A6YYK1 113 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 IGLV2-11P01706 119 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 SULT1A2P50226 295 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 UBE2G2P60604 165 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 ZNF767PQ75MW2 155 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 NDFIP1Q9BT67 221 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 PSG8Q9UQ74 426 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 LYSTQ99698 3801 aa14.23□□□□□ -0.13
NPHP4-206ENST00000468253 CBY3A6NI87 242 aa14.22□□□□□ -0.13
NPHP4-206ENST00000468253 F6UZH7 168 aa14.22□□□□□ -0.13
NPHP4-206ENST00000468253 RGS13O14921 159 aa14.22□□□□□ -0.13
NPHP4-206ENST00000468253 SAPCD1Q5SSQ6 148 aa14.22□□□□□ -0.13
NPHP4-206ENST00000468253 NOP10Q9NPE3 64 aaKnown RBP14.22□□□□□ -0.13
NPHP4-206ENST00000468253 SACSQ9NZJ4 4579 aa14.21□□□□□ -0.13
NPHP4-206ENST00000468253 SNURFLB1AK76 121 aa14.21□□□□□ -0.13
NPHP4-206ENST00000468253 IGLL5B9A064 214 aa14.21□□□□□ -0.13
NPHP4-206ENST00000468253 FLI1Q01543 452 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-206ENST00000468253 IBA57Q5T440 356 aaKnown RBP14.21□□□□□ -0.13
NPHP4-206ENST00000468253 LINC00612Q8N6U2 182 aa14.21□□□□□ -0.13
NPHP4-206ENST00000468253 DNAH1Q9P2D7 4330 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 TRAV21A0A0B4J279 112 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 TEX46H3BTG2 121 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 PEX7O00628 323 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 TDRG1Q3Y452 100 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 C11orf72Q8NBR9 251 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 TP53TG3Q9ULZ0 132 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 KLF12Q9Y4X4 402 aa14.2□□□□□ -0.14
NPHP4-206ENST00000468253 DEFB130BP0DP73 79 aa14.19□□□□□ -0.14
NPHP4-206ENST00000468253 DEFB130AP0DP74 79 aa14.19□□□□□ -0.14
NPHP4-206ENST00000468253 CST9LP1Q5W188 147 aa14.19□□□□□ -0.14
NPHP4-206ENST00000468253 Q6ZQT7 251 aa14.19□□□□□ -0.14
NPHP4-206ENST00000468253 SGK494Q96LW2 274 aa14.19□□□□□ -0.14
NPHP4-206ENST00000468253 APLNQ9ULZ1 77 aa14.19□□□□□ -0.14
NPHP4-206ENST00000468253 PAGE4O60829 102 aa14.18□□□□□ -0.14
NPHP4-206ENST00000468253 FAM159AQ6UWV7 190 aa14.18□□□□□ -0.14
NPHP4-206ENST00000468253 LINC00479Q96M42 142 aa14.18□□□□□ -0.14
NPHP4-206ENST00000468253 GSN-AS1Q9NRJ2 163 aa14.18□□□□□ -0.14
NPHP4-206ENST00000468253 TRBV6-1A0A0K0K1D8 114 aa14.17□□□□□ -0.14
NPHP4-206ENST00000468253 TCL1AP56279 114 aa14.17□□□□□ -0.14
NPHP4-206ENST00000468253 SMUG1Q53HV7 270 aa14.17□□□□□ -0.14
NPHP4-206ENST00000468253 PRNTQ86SH4 94 aa14.17□□□□□ -0.14
NPHP4-206ENST00000468253 C18orf15Q96N68 181 aa14.17□□□□□ -0.14
NPHP4-206ENST00000468253 ZFP30Q9Y2G7 519 aa14.17□□□□□ -0.14
NPHP4-206ENST00000468253 IGHV4-4A0A075B6R2 117 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 ATP5G1P05496 136 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 S100A9P06702 114 aaKnown RBP14.16□□□□□ -0.14
NPHP4-206ENST00000468253 ATP5G3P48201 142 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 LGALS9BQ3B8N2 356 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 LGALS9CQ6DKI2 356 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 COX8CQ7Z4L0 72 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 KCNS1Q96KK3 526 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 TXNDC17Q9BRA2 123 aa14.16□□□□□ -0.14
NPHP4-206ENST00000468253 TRAV34A0A0B4J273 112 aa14.15□□□□□ -0.14
NPHP4-206ENST00000468253 SPINK4O60575 86 aa14.15□□□□□ -0.14
NPHP4-206ENST00000468253 LINC00476Q8WZB0 136 aa14.15□□□□□ -0.14
NPHP4-206ENST00000468253 FMC1Q96HJ9 113 aa14.15□□□□□ -0.14
NPHP4-206ENST00000468253 NDUFAF3Q9BU61 184 aa14.15□□□□□ -0.14
NPHP4-206ENST00000468253 MANBALQ9NQG1 85 aa14.15□□□□□ -0.14
NPHP4-206ENST00000468253 ALMS1Q8TCU4 4167 aa14.15□□□□□ -0.14
NPHP4-206ENST00000468253 TRGV11A0A075B6L2 103 aa14.14□□□□□ -0.15
NPHP4-206ENST00000468253 PFN1P07737 140 aaKnown RBP14.14□□□□□ -0.15
NPHP4-206ENST00000468253 CCL20P78556 96 aa14.14□□□□□ -0.15
NPHP4-206ENST00000468253 MUC21Q5SSG8 566 aa14.14□□□□□ -0.15
NPHP4-206ENST00000468253 SPXQ9BT56 116 aa14.14□□□□□ -0.15
NPHP4-206ENST00000468253 A0A1B0GV50 99 aa14.13□□□□□ -0.15
NPHP4-206ENST00000468253 GCGP01275 180 aa14.13□□□□□ -0.15
NPHP4-206ENST00000468253 ZNF80P51504 273 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-206ENST00000468253 ZNF415Q09FC8 603 aa14.13□□□□□ -0.15
NPHP4-206ENST00000468253 TMEM183BQ1AE95 376 aa14.13□□□□□ -0.15
NPHP4-206ENST00000468253 C8orf49Q96NF6 230 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms