RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ZNRD1Q9P1U0 126 aa5.59□□□□□ -1.51
CLSTN1-204ENST00000464286 INTS1Q8N201 2190 aaKnown RBP5.59□□□□□ -1.52
CLSTN1-204ENST00000464286 MED13Q9UHV7 2174 aa5.59□□□□□ -1.52
CLSTN1-204ENST00000464286 BDP1A6H8Y1 2624 aa5.59□□□□□ -1.52
CLSTN1-204ENST00000464286 C5orf42Q9H799 3197 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 IGLV11-55A0A075B6I3 123 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 IGKV2D-26A0A0A0MRZ7 120 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 IGHV3-21A0A0B4J1V1 117 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 TRAV40A0A0B4J280 105 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 IGHV1-69DA0A0B4J2H0 117 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 A0A1W2PNU3 283 aaPredicted RBP5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 A8MWV9 139 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 B9A039 149 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 K7ERJ3 54 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 M0R3E3 92 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 CDX4O14627 284 aaPredicted RBP5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 KLK10O43240 276 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 NDUFA3O95167 84 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 SPINK8P0C7L1 97 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 SPANXN1Q5VSR9 72 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 SCGB1D4Q6XE38 83 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 DTX2Q86UW9 622 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 TEN1Q86WV5 123 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 FAM57AQ8TBR7 257 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 RNASE6Q93091 150 aaKnown RBP5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 SCGB3A1Q96QR1 104 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 DPM3Q9P2X0 92 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 PRO0461Q9UI25 63 aa5.58□□□□□ -1.52
CLSTN1-204ENST00000464286 NAV3Q8IVL0 2385 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 EPG5Q9HCE0 2579 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 IGLV2-18A0A075B6J9 118 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 IGKV2-40A0A087WW87 121 aaPredicted RBP5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 IGHV3-72A0A0B4J1Y9 119 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 LY6LH3BQJ8 138 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 M0R1W7 72 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 FCN3O75636 299 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 IGKV2D-40P01614 121 aaPredicted RBP5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 RPL32P62910 135 aaKnown RBP5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 SRSF9Q13242 221 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 DIAPH2-AS1Q14236 149 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 ZNF672Q499Z4 452 aaPredicted RBP5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 CFAP126Q5VTH2 177 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 ZFAND6Q6FIF0 208 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 GFRALQ6UXV0 394 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 SEM1Q6ZVN7 128 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 C17orf77Q96MU5 243 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 SMIM2Q9BVW6 85 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 KRTAP4-5Q9BYR2 181 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 FASNP49327 2511 aaKnown RBP5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 GPR179Q6PRD1 2367 aa5.57□□□□□ -1.52
CLSTN1-204ENST00000464286 ZNF688P0C7X2 276 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 SCGB1C2P0DMR2 95 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 C5orf64Q2M2E5 130 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 PRR31Q5SQ13 230 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 ATP1A1-AS1Q5TC04 95 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 TEX29Q8N6K0 151 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 GLMPQ8WWB7 406 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 TOMM6Q96B49 74 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 TIMD4Q96H15 378 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 TMEM141Q96I45 108 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 CTSZQ9UBR2 303 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 FAM215AQ9Y5M1 114 aa5.56□□□□□ -1.52
CLSTN1-204ENST00000464286 LOC107984156A0A0G2JMH3 177 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 TRBV7-9A0A0J9YWB2 115 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 CENPVL3A0A0U1RRI6 287 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 ZNF815PA8K554 130 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 APELAP0DMC3 54 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 COX7A1P24310 79 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 HLA-DMBP28068 263 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 UBE2D1P51668 147 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 SUMO2P61956 95 aaKnown RBP5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 BSPH1Q075Z2 132 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 GAGE5Q13069 117 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 GAGE6Q13070 117 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 FOXE3Q13461 319 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 MRPL23Q16540 153 aaKnown RBP5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 MINOS1Q5TGZ0 78 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 LYPD2Q6UXB3 125 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 C9orf47Q6ZRZ4 202 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 ARL17AQ8IVW1 177 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 LINC00482Q8N8I6 264 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 NRACQ8N912 160 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 NEXN-AS1Q8NBZ9 246 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 METTL26Q96S19 204 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 ANAPC13Q9BS18 74 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 DPH3P1Q9H4G8 78 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 UFC1Q9Y3C8 167 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 MINOS1-NBL1R4GNA1 71 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 AHCTF1Q8WYP5 2266 aa5.55□□□□□ -1.52
CLSTN1-204ENST00000464286 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 OVOL1O14753 267 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 TIMM23O14925 209 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 LGALS1P09382 135 aaKnown RBP5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 CNTFRP26992 372 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 PSMB2P49721 201 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 FXYD7P58549 80 aa5.54□□□□□ -1.52
CLSTN1-204ENST00000464286 UBE2D3P61077 147 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms