RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CST11Q9H112 138 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 LY96Q9Y6Y9 160 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 PARP14Q460N5 1801 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 SDK2Q58EX2 2172 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 IGLV2-18A0A075B6J9 118 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 IGHV3-64A0A075B6Q5 118 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 TRAV40A0A0B4J280 105 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 HMSDA8MTL9 139 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 C5orf67F2Z3F1 127 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 C17orf112F2Z3M2 114 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 M0R2P5 195 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 PSCAO43653 123 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 TNFP01375 233 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 PMP2P02689 132 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 HRES1P13985 223 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 ZNF345Q14585 488 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 ZNF791Q3KP31 576 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-208ENST00000464001 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 ZNF826PQ6ZT77 177 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 HMGN2P46Q86SG4 172 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 FAM19A2Q8N3H0 131 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 HIGD2AQ9BW72 106 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 CXCL16Q9H2A7 254 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 NAA60Q9H7X0 242 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 SAR1AQ9NR31 198 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 RPRMQ9NS64 109 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 IER3IP1Q9Y5U9 82 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 CHCHD2Q9Y6H1 151 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-208ENST00000464001 TCHHQ07283 1943 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 GPR179Q6PRD1 2367 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 MAPKBP1O60336 1514 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 MUC22E2RYF6 1773 aaPredicted RBP2.1□□□□□ -2.07
ITGB1-208ENST00000464001 LTBP2Q14767 1821 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 NINQ8N4C6 2090 aa2.1□□□□□ -2.07
ITGB1-208ENST00000464001 SMARCA4P51532 1647 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 HEATR1Q9H583 2144 aaKnown RBP2.09□□□□□ -2.07
ITGB1-208ENST00000464001 KDM5AP29375 1690 aaKnown RBP2.09□□□□□ -2.07
ITGB1-208ENST00000464001 DCAF1Q9Y4B6 1507 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 TMSB15BA0A087X1C1 80 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 LOC107984156A0A0G2JMH3 177 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 A0A1W2PNM2 257 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 ODF3BA8MYP8 253 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 GEMIN2O14893 280 aaKnown RBP2.09□□□□□ -2.07
ITGB1-208ENST00000464001 C9orf153Q5TBE3 101 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 LINC01545Q5VT33 79 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 ARL17AQ8IVW1 177 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 C5orf17Q8NAS9 161 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 OR2T35Q8NGX2 323 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 PSMF1Q92530 271 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 RAB37Q96AX2 223 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 SLC50A1Q9BRV3 221 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 C14orf132Q9NPU4 83 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 TAS2R8Q9NYW2 309 aa2.09□□□□□ -2.07
ITGB1-208ENST00000464001 SEC16AO15027 2179 aa2.09□□□□□ -2.08
ITGB1-208ENST00000464001 PPIP5K1Q6PFW1 1433 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 RBBP6Q7Z6E9 1792 aaKnown RBP2.08□□□□□ -2.08
ITGB1-208ENST00000464001 IGHV1-24A0A0C4DH33 117 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 PNMA8CA0A1B0GUJ8 204 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 IBA57-AS1B1ANH7 110 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 ZNF736B4DX44 427 aaPredicted RBP2.08□□□□□ -2.08
ITGB1-208ENST00000464001 MCRIP1C9JLW8 97 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 SPINK8P0C7L1 97 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 ETV6P41212 452 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 SSR2P43308 183 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 ZNF846Q147U1 533 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 DEFB113Q30KQ7 82 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 Q56UQ5 140 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 COL5A1-AS1Q5SY13 56 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 OR8B3Q8NGG8 313 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 COL4A5P29400 1685 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 KTN1Q86UP2 1357 aaKnown RBP2.08□□□□□ -2.08
ITGB1-208ENST00000464001 HEATR5BQ9P2D3 2071 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 RP1P56715 2156 aa2.08□□□□□ -2.08
ITGB1-208ENST00000464001 CECR2Q9BXF3 1484 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 CASP8AP2Q9UKL3 1982 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 LRP5O75197 1615 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 IGKV3D-11A0A0A0MRZ8 115 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 C3orf85A0A1B0GTC6 90 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 OOSP1A8MZH6 123 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 YPEL1O60688 119 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 EDF1O60869 148 aaKnown RBP2.07□□□□□ -2.08
ITGB1-208ENST00000464001 HYPMO75409 117 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 ASAH2BP0C7U1 165 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 BRS3P32247 399 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 HINT1P49773 126 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-208ENST00000464001 ERHP84090 104 aaKnown RBP2.07□□□□□ -2.08
ITGB1-208ENST00000464001 PYDC2Q56P42 97 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 SPANXN5Q5MJ07 72 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 Q6ZS92 163 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 FP248Q71RG6 208 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-208ENST00000464001 LINC00269Q8N2A0 174 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 PLPP5Q8NEB5 264 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 COPS9Q8WXC6 57 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 MUCL1Q96DR8 90 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 FAIMQ9NVQ4 179 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 NOP16Q9Y3C1 178 aaKnown RBP2.07□□□□□ -2.08
ITGB1-208ENST00000464001 PATJQ8NI35 1801 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 SLIT2O94813 1529 aa2.07□□□□□ -2.08
ITGB1-208ENST00000464001 MPDZO75970 2070 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms