RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 GCHFRP30047 84 aa11.4□□□□□ -0.58
COL1A1-202ENST00000463440 IBA57Q5T440 356 aaKnown RBP11.4□□□□□ -0.58
COL1A1-202ENST00000463440 Q6ZTI0 123 aa11.4□□□□□ -0.58
COL1A1-202ENST00000463440 GOLT1AQ6ZVE7 132 aa11.4□□□□□ -0.58
COL1A1-202ENST00000463440 ST6GAL2Q96JF0 529 aa11.4□□□□□ -0.58
COL1A1-202ENST00000463440 TMEM167BQ9NRX6 74 aa11.4□□□□□ -0.58
COL1A1-202ENST00000463440 TRGV2A0A075B6R0 118 aa11.39□□□□□ -0.59
COL1A1-202ENST00000463440 G3V3Q6 166 aa11.39□□□□□ -0.59
COL1A1-202ENST00000463440 ARPC5O15511 151 aa11.39□□□□□ -0.59
COL1A1-202ENST00000463440 TCL1AP56279 114 aa11.39□□□□□ -0.59
COL1A1-202ENST00000463440 OR5I1Q13606 314 aa11.39□□□□□ -0.59
COL1A1-202ENST00000463440 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
COL1A1-202ENST00000463440 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
COL1A1-202ENST00000463440 TRGV1A0A0A0MS02 117 aa11.38□□□□□ -0.59
COL1A1-202ENST00000463440 SERTM2A0A1B0GWG4 89 aa11.38□□□□□ -0.59
COL1A1-202ENST00000463440 FAM3BP58499 235 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-202ENST00000463440 Q6AWC8 147 aa11.38□□□□□ -0.59
COL1A1-202ENST00000463440 Q6ZQT7 251 aa11.38□□□□□ -0.59
COL1A1-202ENST00000463440 TP53TG3Q9ULZ0 132 aa11.38□□□□□ -0.59
COL1A1-202ENST00000463440 KLF12Q9Y4X4 402 aa11.38□□□□□ -0.59
COL1A1-202ENST00000463440 DNAH6Q9C0G6 4158 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 K7EQM0 130 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 GNG5P63218 68 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 MUC21Q5SSG8 566 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 C5orf17Q8NAS9 161 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 TMPRSS5Q9H3S3 457 aa11.37□□□□□ -0.59
COL1A1-202ENST00000463440 TRAV26-1A0A087WT03 109 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 CTXND1A0A1B0GTU2 59 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 M0R2N4 97 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 SPINK4O60575 86 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 HOXA5P20719 270 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 AKR1C8PQ5T2L2 129 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 FAM159AQ6UWV7 190 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 TREM1Q9NP99 234 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 BIRC6Q9NR09 4857 aa11.36□□□□□ -0.59
COL1A1-202ENST00000463440 IGLV2-18A0A075B6J9 118 aa11.35□□□□□ -0.59
COL1A1-202ENST00000463440 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
COL1A1-202ENST00000463440 SMLR1H3BR10 107 aa11.35□□□□□ -0.59
COL1A1-202ENST00000463440 CCL18P55774 89 aa11.35□□□□□ -0.59
COL1A1-202ENST00000463440 SUMO1P63165 101 aaKnown RBP11.35□□□□□ -0.59
COL1A1-202ENST00000463440 SSX7Q7RTT5 188 aa11.35□□□□□ -0.59
COL1A1-202ENST00000463440 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
COL1A1-202ENST00000463440 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 TRAV21A0A0B4J279 112 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 A0A0J9YY99 117 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 H3BNG1 76 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 TCRAP04437 139 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 TMEM183BQ1AE95 376 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 TMEM183AQ8IXX5 376 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 CYTL1Q9NRR1 136 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 MRPL16Q9NX20 251 aaKnown RBP11.34□□□□□ -0.59
COL1A1-202ENST00000463440 NAGKQ9UJ70 344 aa11.34□□□□□ -0.59
COL1A1-202ENST00000463440 A0A1W2PRE2 83 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 GGTLC3B5MD39 225 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 F6UZH7 168 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 ZNF345Q14585 488 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 ZNF726P1Q15940 193 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 LINC00336Q6ZUF6 198 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 TVP23CQ96ET8 276 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 EPDR1Q9UM22 224 aa11.33□□□□□ -0.6
COL1A1-202ENST00000463440 NACAE9PAV3 2078 aa11.32□□□□□ -0.6
COL1A1-202ENST00000463440 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
COL1A1-202ENST00000463440 KCNRGQ8N5I3 272 aa11.32□□□□□ -0.6
COL1A1-202ENST00000463440 CYB561D1Q8N8Q1 229 aa11.32□□□□□ -0.6
COL1A1-202ENST00000463440 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
COL1A1-202ENST00000463440 SPXQ9BT56 116 aa11.32□□□□□ -0.6
COL1A1-202ENST00000463440 MDFICQ9P1T7 246 aa11.32□□□□□ -0.6
COL1A1-202ENST00000463440 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
COL1A1-202ENST00000463440 HMSDA8MTL9 139 aa11.31□□□□□ -0.6
COL1A1-202ENST00000463440 Q6ZR54 194 aa11.31□□□□□ -0.6
COL1A1-202ENST00000463440 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
COL1A1-202ENST00000463440 LINC00588Q9Y4M8 146 aa11.31□□□□□ -0.6
COL1A1-202ENST00000463440 DNAH10Q8IVF4 4471 aa11.31□□□□□ -0.6
COL1A1-202ENST00000463440 A0A0D9SG52 128 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 IFNA7P01567 189 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 IGHV3-53P01767 116 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 FGF8P55075 233 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-202ENST00000463440 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-202ENST00000463440 ZFP69Q49AA0 526 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 TMEM75Q8N9X5 138 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 NKX6-2Q9C056 277 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-202ENST00000463440 SDF2L1Q9HCN8 221 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 MUC4Q99102 2169 aa11.3□□□□□ -0.6
COL1A1-202ENST00000463440 KANTRA0A1W2PQU2 76 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 UBE2G2P60604 165 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 SLAQ13239 276 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 PRNTQ86SH4 94 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 OR11H4Q8NGC9 324 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 STOML3Q8TAV4 291 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 C8orf49Q96NF6 230 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
COL1A1-202ENST00000463440 FRAS1Q86XX4 4008 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms