RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 C3orf79P0CE67 100 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 PIFOQ8TCI5 191 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 RITA1Q96K30 269 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 IGHV7-81A0A0B4J1V7 117 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 TRAV8-2A0A0B4J237 113 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 IGLV2-23P01705 113 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 ZNF491Q8N8L2 437 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 FXYD5Q96DB9 178 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 LAMTOR3Q9UHA4 124 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 IGLC7A0M8Q6 106 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 POU2AF1Q16633 256 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 Q8NFD4 153 aa10.08□□□□□ -0.8
NUP58-206ENST00000463407 COL4A3Q01955 1670 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 CT83Q5H943 113 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 SPTBN1Q01082 2364 aaKnown RBP10.07□□□□□ -0.8
NUP58-206ENST00000463407 VWC2LB2RUY7 222 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 C9JQL5 133 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 ANGP03950 147 aaKnown RBP10.07□□□□□ -0.8
NUP58-206ENST00000463407 SLAQ13239 276 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 PKDREJQ9NTG1 2253 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 FAM231BA6NCW3 169 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 C19orf84I3L1E1 186 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 FAM104BQ5XKR9 115 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 NKAPP1Q8N9T2 125 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 AJUBAQ96IF1 538 aa10.07□□□□□ -0.8
NUP58-206ENST00000463407 HLA-DMBP28068 263 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 C5orf56Q8N8D9 126 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 PCNX2A6NKB5 2137 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 TECTAO75443 2155 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 BCL6BQ8N143 479 aaPredicted RBP10.06□□□□□ -0.8
NUP58-206ENST00000463407 ZC2HC1AQ96GY0 325 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 FBXL19-AS1Q494R0 122 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
NUP58-206ENST00000463407 ZNF625Q96I27 306 aaPredicted RBP10.06□□□□□ -0.8
NUP58-206ENST00000463407 C17orf77Q96MU5 243 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 OBSL1O75147 1896 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 ROS1P08922 2347 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 A0A087WW49 117 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 ZNF843Q8N446 348 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 U3KQE9 123 aa10.06□□□□□ -0.8
NUP58-206ENST00000463407 SDHAF1A6NFY7 115 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 Q8N8P6 123 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 SPAG8Q99932 426 aaPredicted RBP10.05□□□□□ -0.8
NUP58-206ENST00000463407 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 ZGRF1Q86YA3 2104 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 IGKV2D-24A0A075B6R9 120 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 HLA-DRB4P13762 266 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 PMVKQ15126 192 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 MRPL51Q4U2R6 128 aaKnown RBP10.05□□□□□ -0.8
NUP58-206ENST00000463407 HLA-DRB4X5D2U9 266 aa10.05□□□□□ -0.8
NUP58-206ENST00000463407 IGKV1OR2-108A0A075B7D4 117 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 CLPSL1A2RUU4 121 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 ZNF114Q8NC26 417 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 ASPHD1Q5U4P2 390 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 TRAV8-4A0A0B4J246 113 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 SMIM27A0A1W2PRY6 76 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 ESDP10768 282 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 PFN2P35080 140 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 RHOHQ15669 191 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 V9GYV3 84 aa10.04□□□□□ -0.8
NUP58-206ENST00000463407 A0A087X0K7 114 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 GNRH2O43555 120 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 Q8N9W7 124 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 C2orf66Q6UXQ4 117 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 DYNAPQ8N1N2 210 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 IGHV1-24A0A0C4DH33 117 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 CHAC1Q9BUX1 264 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 Q9HAA7 133 aa10.03□□□□□ -0.8
NUP58-206ENST00000463407 MYCNOSP40205 109 aa10.02□□□□□ -0.8
NUP58-206ENST00000463407 LRRC75A-AS1Q8N1F1 130 aa10.02□□□□□ -0.8
NUP58-206ENST00000463407 Q8N7P7 452 aa10.02□□□□□ -0.8
NUP58-206ENST00000463407 WIPF2Q8TF74 440 aaPredicted RBP10.02□□□□□ -0.8
NUP58-206ENST00000463407 Q6ZQT7 251 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 DNAJC9-AS1A6NH13 148 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 PRR20EP86478 221 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 PRR20CP86479 221 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 PRR20DP86480 221 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 PRR20BP86481 221 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 PRR20AP86496 221 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 FAM231DQ6ZW35 169 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 Q0VG73 95 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 Q6ZSR3 168 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
NUP58-206ENST00000463407 C4orf3Q8WVX3 66 aa10.02□□□□□ -0.81
NUP58-206ENST00000463407 LOXL1Q08397 574 aaPredicted RBP10.01□□□□□ -0.81
NUP58-206ENST00000463407 C18orf32Q8TCD1 76 aa10.01□□□□□ -0.81
NUP58-206ENST00000463407 TEX48A0A1B0GUV7 120 aa10.01□□□□□ -0.81
NUP58-206ENST00000463407 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
NUP58-206ENST00000463407 PRSS57Q6UWY2 283 aa10.01□□□□□ -0.81
NUP58-206ENST00000463407 NAA38Q9BRA0 125 aaKnown RBP10.01□□□□□ -0.81
NUP58-206ENST00000463407 HIST2H2BCQ6DN03 193 aa10.01□□□□□ -0.81
NUP58-206ENST00000463407 GTF3C1Q12789 2109 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms