RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 TRGV1A0A0A0MS02 117 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 HMGB3O15347 200 aaKnown RBP8.6□□□□□ -1.03
LINC00879-202ENST00000463200 ZNF324O75467 553 aaPredicted RBP8.6□□□□□ -1.03
LINC00879-202ENST00000463200 CXorf1O96002 111 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 ARL14EPLP0DKL9 152 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 SOHLH1Q5JUK2 328 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 IBA57Q5T440 356 aaKnown RBP8.6□□□□□ -1.03
LINC00879-202ENST00000463200 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 Q8TAT8 98 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 TMED6Q8WW62 240 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 ZNF503Q96F45 646 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 GSN-AS1Q9NRJ2 163 aa8.6□□□□□ -1.03
LINC00879-202ENST00000463200 TMEM238LA0A1B0GVL6 79 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 STAG3L2P0CL84 134 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 STAG3L3P0CL85 134 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 AKR1C8PQ5T2L2 129 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 ZFAND2AQ8N6M9 145 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 RAB24Q969Q5 203 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 ST6GAL2Q96JF0 529 aa8.59□□□□□ -1.03
LINC00879-202ENST00000463200 TRGV11A0A075B6L2 103 aa8.58□□□□□ -1.04
LINC00879-202ENST00000463200 ARPC5O15511 151 aa8.58□□□□□ -1.04
LINC00879-202ENST00000463200 EIF3GO75821 320 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC00879-202ENST00000463200 TCL1AP56279 114 aa8.58□□□□□ -1.04
LINC00879-202ENST00000463200 ZFP69Q49AA0 526 aa8.58□□□□□ -1.04
LINC00879-202ENST00000463200 RPL7L1Q6DKI1 246 aaKnown RBP8.58□□□□□ -1.04
LINC00879-202ENST00000463200 LINC00336Q6ZUF6 198 aa8.58□□□□□ -1.04
LINC00879-202ENST00000463200 TRAV26-1A0A087WT03 109 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 TRAV21A0A0B4J279 112 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 FBLL1A6NHQ2 334 aaKnown RBP8.57□□□□□ -1.04
LINC00879-202ENST00000463200 M0R2N4 97 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 GCHFRP30047 84 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 Q5BKY6 102 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 Q6ZTI0 123 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 C5orf17Q8NAS9 161 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 SH3BGRL3Q9H299 93 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 TREM1Q9NP99 234 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 NAGKQ9UJ70 344 aa8.57□□□□□ -1.04
LINC00879-202ENST00000463200 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 CTXND1A0A1B0GTU2 59 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 RNF222A6NCQ9 220 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 H3BNG1 76 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 SLAQ13239 276 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 LGALS9BQ3B8N2 356 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 MUC21Q5SSG8 566 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 Q6AWC8 147 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 LINC00612Q8N6U2 182 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 STOML3Q8TAV4 291 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 KCNS1Q96KK3 526 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 TMPRSS5Q9H3S3 457 aa8.56□□□□□ -1.04
LINC00879-202ENST00000463200 KMT2AQ03164 3969 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 A0A0J9YY99 117 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 SPINK4O60575 86 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 IFNA7P01567 189 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 PPT1P50897 306 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
LINC00879-202ENST00000463200 EIF5AP63241 154 aaKnown RBP8.55□□□□□ -1.04
LINC00879-202ENST00000463200 PRR9Q5T870 116 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 C18orf15Q96N68 181 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 SPXQ9BT56 116 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 NKX6-2Q9C056 277 aaPredicted RBP8.55□□□□□ -1.04
LINC00879-202ENST00000463200 KLF12Q9Y4X4 402 aa8.55□□□□□ -1.04
LINC00879-202ENST00000463200 KANTRA0A1W2PQU2 76 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 A0A1W2PRE2 83 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 TCRAP04437 139 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 GNG5P63218 68 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 SSX7Q7RTT5 188 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 TMEM183AQ8IXX5 376 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 SDF2L1Q9HCN8 221 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 MRPL16Q9NX20 251 aaKnown RBP8.54□□□□□ -1.04
LINC00879-202ENST00000463200 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
LINC00879-202ENST00000463200 TRGV4A0A0C4DH28 118 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 A0A0D9SG52 128 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 F6UZH7 168 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 ZNF345Q14585 488 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 SAPCD1Q5SSQ6 148 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 CYB561D1Q8N8Q1 229 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 EPDR1Q9UM22 224 aa8.53□□□□□ -1.04
LINC00879-202ENST00000463200 EPPK1P58107 5090 aaKnown RBP8.52□□□□□ -1.05
LINC00879-202ENST00000463200 TRAV8-1A0A0A6YYK1 113 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 PAX4O43316 350 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 PFDN1O60925 122 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 HOXA5P20719 270 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 FLI1Q01543 452 aaPredicted RBP8.52□□□□□ -1.05
LINC00879-202ENST00000463200 SMUG1Q53HV7 270 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 C1orf134Q5TEV5 83 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 PRNTQ86SH4 94 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 TMEM75Q8N9X5 138 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 PCNPQ8WW12 178 aaKnown RBP8.52□□□□□ -1.05
LINC00879-202ENST00000463200 PRO0255Q9UI72 69 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 PSG8Q9UQ74 426 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 ICOSQ9Y6W8 199 aa8.52□□□□□ -1.05
LINC00879-202ENST00000463200 MAP1LC3B2A6NCE7 125 aa8.51□□□□□ -1.05
LINC00879-202ENST00000463200 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
LINC00879-202ENST00000463200 IGHV3-53P01767 116 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms