RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 SERF2P84101 59 aa10.86□□□□□ -0.67
LIMS1-211ENST00000462817 IBA57Q5T440 356 aaKnown RBP10.86□□□□□ -0.67
LIMS1-211ENST00000462817 C11orf72Q8NBR9 251 aa10.86□□□□□ -0.67
LIMS1-211ENST00000462817 KLF12Q9Y4X4 402 aa10.86□□□□□ -0.67
LIMS1-211ENST00000462817 LENEPQ9Y5L5 61 aa10.86□□□□□ -0.67
LIMS1-211ENST00000462817 PRSS29PA6NIE9 313 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 ARL14EPLP0DKL9 152 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 ATP6V0CP27449 155 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 ZNF415Q09FC8 603 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 Q5BKY6 102 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 MUC21Q5SSG8 566 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 FAM159AQ6UWV7 190 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 GOLT1AQ6ZVE7 132 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 OR2T35Q8NGX2 323 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 OR2G3Q8NGZ4 309 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 TP53TG3Q9ULZ0 132 aa10.85□□□□□ -0.67
LIMS1-211ENST00000462817 SPINK4O60575 86 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 HOXA5P20719 270 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 C1orf134Q5TEV5 83 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 Q6ZQT7 251 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 SSX7Q7RTT5 188 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 IQCF2Q8IXL9 164 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 TMED6Q8WW62 240 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 ACTR3CQ9C0K3 210 aaPredicted RBP10.84□□□□□ -0.67
LIMS1-211ENST00000462817 NAGKQ9UJ70 344 aa10.84□□□□□ -0.67
LIMS1-211ENST00000462817 K7EQM0 130 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 STAG3L2P0CL84 134 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 STAG3L3P0CL85 134 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 ARL6IP6Q8N6S5 226 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 RAB24Q969Q5 203 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 NDFIP1Q9BT67 221 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
LIMS1-211ENST00000462817 TNFSF18Q9UNG2 199 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
LIMS1-211ENST00000462817 NACAE9PAV3 2078 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 TRGV11A0A075B6L2 103 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 H3BNG1 76 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 CXorf1O96002 111 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 GCHFRP30047 84 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 GNG5P63218 68 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 Q6AWC8 147 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 RPL7L1Q6DKI1 246 aaKnown RBP10.82□□□□□ -0.68
LIMS1-211ENST00000462817 Q6ZR54 194 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 ST6GAL2Q96JF0 529 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 SH3BGRL3Q9H299 93 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 TREM1Q9NP99 234 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 TMEM167BQ9NRX6 74 aa10.82□□□□□ -0.68
LIMS1-211ENST00000462817 TRAV21A0A0B4J279 112 aa10.81□□□□□ -0.68
LIMS1-211ENST00000462817 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
LIMS1-211ENST00000462817 RTL8CO15255 209 aa10.81□□□□□ -0.68
LIMS1-211ENST00000462817 IGHV3-53P01767 116 aa10.81□□□□□ -0.68
LIMS1-211ENST00000462817 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
LIMS1-211ENST00000462817 TMEM183AQ8IXX5 376 aa10.81□□□□□ -0.68
LIMS1-211ENST00000462817 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
LIMS1-211ENST00000462817 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 TRAV8-1A0A0A6YYK1 113 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 NBDYA0A0U1RRE5 68 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 RNF222A6NCQ9 220 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 PAX4O43316 350 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 SLAQ13239 276 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 C5orf17Q8NAS9 161 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 MDFICQ9P1T7 246 aa10.8□□□□□ -0.68
LIMS1-211ENST00000462817 F6UZH7 168 aa10.79□□□□□ -0.68
LIMS1-211ENST00000462817 SUMO1P63165 101 aaKnown RBP10.79□□□□□ -0.68
LIMS1-211ENST00000462817 AKR1C8PQ5T2L2 129 aa10.79□□□□□ -0.68
LIMS1-211ENST00000462817 SGK494Q96LW2 274 aa10.79□□□□□ -0.68
LIMS1-211ENST00000462817 SPXQ9BT56 116 aa10.79□□□□□ -0.68
LIMS1-211ENST00000462817 Q9H8V8 135 aa10.79□□□□□ -0.68
LIMS1-211ENST00000462817 TRGV4A0A0C4DH28 118 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 TAAR5O14804 337 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 ARPC5O15511 151 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 TCRAP04437 139 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 SDF2L1Q9HCN8 221 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 PRO0255Q9UI72 69 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 ICOSQ9Y6W8 199 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 DNAH2Q9P225 4427 aa10.78□□□□□ -0.68
LIMS1-211ENST00000462817 ESRGQ1W209 222 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 ZFP69Q49AA0 526 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 TTC32Q5I0X7 151 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 SUN5Q8TC36 379 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 VSIG2Q96IQ7 327 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 KCNS1Q96KK3 526 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 EPDR1Q9UM22 224 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 HHLA3Q9XRX5 114 aa10.77□□□□□ -0.69
LIMS1-211ENST00000462817 A0A096LPF7 62 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 CTXND1A0A1B0GTU2 59 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 GNRH2O43555 120 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 IFNA7P01567 189 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 PRNTQ86SH4 94 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 C6orf223Q8N319 242 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 CYB561D1Q8N8Q1 229 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 C8orf49Q96NF6 230 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 PSG8Q9UQ74 426 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 DNAH17Q9UFH2 4485 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 MUC4Q99102 2169 aa10.76□□□□□ -0.69
LIMS1-211ENST00000462817 FLI1Q01543 452 aaPredicted RBP10.75□□□□□ -0.69
LIMS1-211ENST00000462817 PCNPQ8WW12 178 aaKnown RBP10.75□□□□□ -0.69
LIMS1-211ENST00000462817 TVP23CQ96ET8 276 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms