RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 BOLA2-SMG1P6H3BVE0 249 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 OR7C2O60412 319 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 ZNF324O75467 553 aaPredicted RBP4.11□□□□□ -1.75
VPS36-202ENST00000462289 CXorf1O96002 111 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 CA1P00915 261 aaPredicted RBP4.11□□□□□ -1.75
VPS36-202ENST00000462289 OR10J4P0C629 311 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 CT45A10P0DMU9 189 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 TPT1P13693 172 aaKnown RBP4.11□□□□□ -1.75
VPS36-202ENST00000462289 MIFP14174 115 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 RPL35AP18077 110 aaKnown RBP4.11□□□□□ -1.75
VPS36-202ENST00000462289 SULT1A2P50226 295 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 RAB5CP51148 216 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 NUTF2P61970 127 aaKnown RBP4.11□□□□□ -1.75
VPS36-202ENST00000462289 EIF5AP63241 154 aaKnown RBP4.11□□□□□ -1.75
VPS36-202ENST00000462289 EBLN2Q6P2I7 272 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 EXOC3-AS1Q8N2X6 119 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 ZNF738Q8NE65 137 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 LINC00477Q96M19 166 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 LINC00052Q96N35 136 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 TCEAL7Q9BRU2 100 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 ACTR3CQ9C0K3 210 aaPredicted RBP4.11□□□□□ -1.75
VPS36-202ENST00000462289 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 Q9H3A6 140 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 TMEM167BQ9NRX6 74 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 ZNF492Q9P255 531 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 KLF12Q9Y4X4 402 aa4.11□□□□□ -1.75
VPS36-202ENST00000462289 TRBV6-1A0A0K0K1D8 114 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 SERTM2A0A1B0GWG4 89 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 A0A1W2PPV4 95 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 FAM74A7A6NL05 159 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 H3BTX0 84 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 EIF3GO75821 320 aaKnown RBP eCLIP4.1□□□□□ -1.75
VPS36-202ENST00000462289 SNRPCP09234 159 aaKnown RBP4.1□□□□□ -1.75
VPS36-202ENST00000462289 NPSP0C0P6 89 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 CDKN1BP46527 198 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 FAM122CQ6P4D5 195 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 TMEM256Q8N2U0 113 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 LINC00612Q8N6U2 182 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 C5orf17Q8NAS9 161 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 OR11H2Q8NH07 326 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 RXFP4Q8TDU9 374 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 TVP23CQ96ET8 276 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 VGLL1Q99990 258 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 ZNF471Q9BX82 626 aaPredicted RBP4.1□□□□□ -1.75
VPS36-202ENST00000462289 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 NKX6-2Q9C056 277 aaPredicted RBP4.1□□□□□ -1.75
VPS36-202ENST00000462289 XCL2Q9UBD3 114 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 DNAH1Q9P2D7 4330 aa4.1□□□□□ -1.75
VPS36-202ENST00000462289 IGHV4-28A0A0C4DH34 117 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 MAP1LC3B2A6NCE7 125 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 FBLL1A6NHQ2 334 aaKnown RBP4.09□□□□□ -1.75
VPS36-202ENST00000462289 C3orf84H3BNL1 204 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 NDUFS6O75380 124 aaKnown RBP4.09□□□□□ -1.75
VPS36-202ENST00000462289 TCRAP04437 139 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 RANP62826 216 aaKnown RBP4.09□□□□□ -1.75
VPS36-202ENST00000462289 HIST1H1AQ02539 215 aaPredicted RBP4.09□□□□□ -1.75
VPS36-202ENST00000462289 TDRG1Q3Y452 100 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 ZFP69Q49AA0 526 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 AKR1C8PQ5T2L2 129 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 PRR9Q5T870 116 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 GFI1BQ5VTD9 330 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 Q6AWC8 147 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 OR10J6PQ8NGY7 276 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 MUC7Q8TAX7 377 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 RNASE8Q8TDE3 154 aaKnown RBP4.09□□□□□ -1.75
VPS36-202ENST00000462289 RARRES2Q99969 163 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 MAP1LC3BQ9GZQ8 125 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 AAMDCQ9H7C9 122 aa4.09□□□□□ -1.75
VPS36-202ENST00000462289 YTHDF2Q9Y5A9 579 aaKnown RBP4.09□□□□□ -1.75
VPS36-202ENST00000462289 KMT2AQ03164 3969 aa4.09□□□□□ -1.76
VPS36-202ENST00000462289 VPS13DQ5THJ4 4388 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 hCG_2014768A0A024R1R8 64 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 IGKV2-40A0A087WW87 121 aaPredicted RBP4.08□□□□□ -1.76
VPS36-202ENST00000462289 A0A0J9YWU9 116 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 TMEM189A5PLL7 270 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 PGPA6NDG6 321 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 H7BYZ3 331 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 M0R2Z0 102 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 HMGB3O15347 200 aaKnown RBP4.08□□□□□ -1.76
VPS36-202ENST00000462289 INSP01308 110 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 IGKV2D-40P01614 121 aaPredicted RBP4.08□□□□□ -1.76
VPS36-202ENST00000462289 ZNF138P52744 262 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 TAS2R60P59551 318 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 SPINK13Q1W4C9 94 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 ANXA2RQ3ZCQ2 193 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 EIF5AL1Q6IS14 154 aaKnown RBP4.08□□□□□ -1.76
VPS36-202ENST00000462289 TMEM75Q8N9X5 138 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 C11orf72Q8NBR9 251 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 OR4B1Q8NGF8 309 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 LRRC20Q8TCA0 184 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 C2CD4CQ8TF44 421 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 BLNKQ8WV28 456 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 HIST1H2BAQ96A08 127 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 C11orf52Q96A22 123 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 DAZAP1Q96EP5 407 aaKnown RBP4.08□□□□□ -1.76
VPS36-202ENST00000462289 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 ATG101Q9BSB4 218 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 EPDR1Q9UM22 224 aa4.08□□□□□ -1.76
VPS36-202ENST00000462289 PFDN1O60925 122 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 LEPP41159 167 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms