RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 GNG5P63218 68 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 CD300CQ08708 224 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 ZFAND2AQ8N6M9 145 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 C16orf74Q96GX8 76 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 PLA2G2EQ9NZK7 142 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 DKK2Q9UBU2 259 aa9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 YTHDF2Q9Y5A9 579 aaKnown RBP9.47□□□□□ -0.89
RAB11FIP3-207ENST00000461009 IGHV4-4A0A075B6R2 117 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 LYRM9A8MSI8 78 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 GGTLC3B5MD39 225 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 RGS13O14921 159 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 ZNF324O75467 553 aaPredicted RBP9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 AZU1P20160 251 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 C12orf74Q32Q52 190 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 C9orf62Q8N4C0 152 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 CYB561D1Q8N8Q1 229 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 Q8TAT8 98 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TMEM263Q8WUH6 116 aaKnown RBP9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 ATG101Q9BSB4 218 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 APLNQ9ULZ1 77 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 CELA1Q9UNI1 258 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TIMM8BQ9Y5J9 83 aaPredicted RBP9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 ARL2-SNX15V9GYD0 113 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 HYDINQ4G0P3 5121 aa9.46□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FAM74A7A6NL05 159 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PRM2P04554 102 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 SULT1A2P50226 295 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 BTN1A1Q13410 526 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 CST9LP1Q5W188 147 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 EIF4E3Q8N5X7 224 aaKnown RBP9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 NDUFAF3Q9BU61 184 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
RAB11FIP3-207ENST00000461009 CBY3A6NI87 242 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 SNURFLB1AK76 121 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 DAD1P61803 113 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 SAPCD1Q5SSQ6 148 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TMEM75Q8N9X5 138 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 ZNF680Q8NEM1 530 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TCEAL7Q9BRU2 100 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PLECQ15149 4684 aaKnown RBP9.44□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 P0DMU3 169 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FAM231AP0DMU4 169 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FAM231CP0DMU5 169 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FLI1Q01543 452 aaPredicted RBP9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 ANXA2RQ3ZCQ2 193 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 Q6AWC8 147 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 ZNF767PQ75MW2 155 aa9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 RNASE8Q8TDE3 154 aaKnown RBP9.43□□□□□ -0.9
RAB11FIP3-207ENST00000461009 IGHV1OR15-1A0A075B7D0 117 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 A0A1B0GV50 99 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PEX7O00628 323 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PAGE4O60829 102 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PRR9Q5T870 116 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FAM210BQ96KR6 192 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 SGK494Q96LW2 274 aa9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 NOP10Q9NPE3 64 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP3-207ENST00000461009 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
RAB11FIP3-207ENST00000461009 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
RAB11FIP3-207ENST00000461009 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
RAB11FIP3-207ENST00000461009 SMUG1Q53HV7 270 aa9.41□□□□□ -0.9
RAB11FIP3-207ENST00000461009 MANBALQ9NQG1 85 aa9.41□□□□□ -0.9
RAB11FIP3-207ENST00000461009 S100A9P06702 114 aaKnown RBP9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 NKX2-5P52952 324 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 UBE2G1P62253 170 aa9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 DAZ2Q13117 558 aaKnown RBP9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 IBA57Q5T440 356 aaKnown RBP9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TVP23CQ96ET8 276 aa9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 FMC1Q96HJ9 113 aa9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 TXNDC17Q9BRA2 123 aa9.4□□□□□ -0.9
RAB11FIP3-207ENST00000461009 EPPK1P58107 5090 aaKnown RBP9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 TRGV11A0A075B6L2 103 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 TRAV34A0A0B4J273 112 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 IFNA1P01562 189 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 AKR1C3P42330 323 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 BLOC1S1P78537 153 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 LINC00479Q96M42 142 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 GSN-AS1Q9NRJ2 163 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 ZFP30Q9Y2G7 519 aa9.39□□□□□ -0.91
RAB11FIP3-207ENST00000461009 GCGP01275 180 aa9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 HTN3P15516 51 aa9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 TAGLN2P37802 199 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 ATP5G3P48201 142 aa9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 ZNF415Q09FC8 603 aa9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 MUC21Q5SSG8 566 aa9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
RAB11FIP3-207ENST00000461009 POM121L12Q8N7R1 296 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms