RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
SCAMP4-206ENST00000460767 TMEM263Q8WUH6 116 aaKnown RBP9.62□□□□□ -0.87
SCAMP4-206ENST00000460767 TMEM208Q9BTX3 173 aa9.62□□□□□ -0.87
SCAMP4-206ENST00000460767 C7orf71A4D174 169 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 PGPA6NDG6 321 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 CXorf1O96002 111 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 SEC11BP0C7V7 166 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 TMEM78Q5T7P6 136 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 Q8TAT8 98 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 STOML3Q8TAV4 291 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 C16orf74Q96GX8 76 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 LINC01587Q99440 93 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 PYGO2Q9BRQ0 406 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 NIPSNAP3BQ9BS92 247 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 TMEM167BQ9NRX6 74 aa9.61□□□□□ -0.87
SCAMP4-206ENST00000460767 TRAV12-3A0A0B4J271 114 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 CSN1S1P47710 185 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 FAM3BP58499 235 aaPredicted RBP9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 BTN1A1Q13410 526 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 ANXA2RQ3ZCQ2 193 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 LGALSLQ3ZCW2 172 aaPredicted RBP9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 Q6AWC8 147 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 Q6ZQT7 251 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 ZNF767PQ75MW2 155 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 C11orf72Q8NBR9 251 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 TVP23CQ96ET8 276 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
SCAMP4-206ENST00000460767 IGLV2-18A0A075B6J9 118 aa9.59□□□□□ -0.87
SCAMP4-206ENST00000460767 C1QBP02746 253 aa9.59□□□□□ -0.87
SCAMP4-206ENST00000460767 FHITP49789 147 aa9.59□□□□□ -0.87
SCAMP4-206ENST00000460767 EMP1P54849 157 aa9.59□□□□□ -0.87
SCAMP4-206ENST00000460767 TMUB2Q71RG4 321 aa9.59□□□□□ -0.87
SCAMP4-206ENST00000460767 UBE2DNLQ8IWF7 75 aa9.59□□□□□ -0.87
SCAMP4-206ENST00000460767 C5orf17Q8NAS9 161 aa9.59□□□□□ -0.87
SCAMP4-206ENST00000460767 TRAV8-1A0A0A6YYK1 113 aa9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 SERTM2A0A1B0GWG4 89 aa9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 TCRAP04437 139 aa9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 DAZ2Q13117 558 aaKnown RBP9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 CCDC28AQ8IWP9 274 aa9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 MBD3L1Q8WWY6 194 aa9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 TMPRSS5Q9H3S3 457 aa9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 TP53TG3Q9ULZ0 132 aa9.58□□□□□ -0.88
SCAMP4-206ENST00000460767 KANTRA0A1W2PQU2 76 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 GPX1P07203 203 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 GNG5P63218 68 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 TNP2Q05952 138 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 TDRG1Q3Y452 100 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 FAM74A1Q5RGS3 127 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 AKR1C8PQ5T2L2 129 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 GOLT1AQ6ZVE7 132 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 HYLS1Q96M11 299 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 C18orf15Q96N68 181 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 TIMM8BQ9Y5J9 83 aaPredicted RBP9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 ARL2-SNX15V9GYD0 113 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
SCAMP4-206ENST00000460767 MAP1LC3B2A6NCE7 125 aa9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 FAM74A7A6NL05 159 aa9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 J3KRW8 73 aa9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 RNASE4P34096 147 aaKnown RBP9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 EIF4E3Q8N5X7 224 aaKnown RBP9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 ZNF471Q9BX82 626 aaPredicted RBP9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 MAP1LC3BQ9GZQ8 125 aa9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 SCRT2Q9NQ03 307 aa9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 EPDR1Q9UM22 224 aa9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 HERC1Q15751 4861 aa9.56□□□□□ -0.88
SCAMP4-206ENST00000460767 FGF8P55075 233 aaPredicted RBP9.55□□□□□ -0.88
SCAMP4-206ENST00000460767 SUMO1P63165 101 aaKnown RBP9.55□□□□□ -0.88
SCAMP4-206ENST00000460767 IBA57Q5T440 356 aaKnown RBP9.55□□□□□ -0.88
SCAMP4-206ENST00000460767 DPPA3Q6W0C5 159 aa9.55□□□□□ -0.88
SCAMP4-206ENST00000460767 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
SCAMP4-206ENST00000460767 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 A0A1B0GVG6 124 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 CBY3A6NI87 242 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 TPT1P13693 172 aaKnown RBP9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 TCL1AP56279 114 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 DAD1P61803 113 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 EIF5AP63241 154 aaKnown RBP9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 COX8CQ7Z4L0 72 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 C9orf62Q8N4C0 152 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 CYB561D1Q8N8Q1 229 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 TMEM75Q8N9X5 138 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 ZNF680Q8NEM1 530 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 ATG101Q9BSB4 218 aa9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 NOP10Q9NPE3 64 aaKnown RBP9.54□□□□□ -0.88
SCAMP4-206ENST00000460767 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
SCAMP4-206ENST00000460767 FBLL1A6NHQ2 334 aaKnown RBP9.53□□□□□ -0.88
SCAMP4-206ENST00000460767 SPINK4O60575 86 aa9.53□□□□□ -0.88
SCAMP4-206ENST00000460767 HTN1P15515 57 aa9.53□□□□□ -0.88
SCAMP4-206ENST00000460767 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
SCAMP4-206ENST00000460767 KLF12Q9Y4X4 402 aa9.53□□□□□ -0.88
SCAMP4-206ENST00000460767 ZNF80P51504 273 aaPredicted RBP9.52□□□□□ -0.89
SCAMP4-206ENST00000460767 C6orf223Q8N319 242 aa9.52□□□□□ -0.89
SCAMP4-206ENST00000460767 HIST1H2BAQ96A08 127 aa9.52□□□□□ -0.89
SCAMP4-206ENST00000460767 LINC00479Q96M42 142 aa9.52□□□□□ -0.89
SCAMP4-206ENST00000460767 TCEAL7Q9BRU2 100 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms