RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 HOXB4P17483 251 aaPredicted RBP11.64□□□□□ -0.55
PTPRU-205ENST00000460170 DTX2Q86UW9 622 aa11.64□□□□□ -0.55
PTPRU-205ENST00000460170 K7EIM0 57 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 KLF5Q13887 457 aaPredicted RBP11.63□□□□□ -0.55
PTPRU-205ENST00000460170 ANXA2RQ3ZCQ2 193 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 TRPT1Q86TN4 253 aaKnown RBP11.63□□□□□ -0.55
PTPRU-205ENST00000460170 FAM167A-AS1Q96KT0 104 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 RBMY1BA6NDE4 496 aaKnown RBP11.63□□□□□ -0.55
PTPRU-205ENST00000460170 RBMY1EA6NEQ0 496 aaKnown RBP11.63□□□□□ -0.55
PTPRU-205ENST00000460170 RBMY1DP0C7P1 496 aaKnown RBP11.63□□□□□ -0.55
PTPRU-205ENST00000460170 P0C879 139 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
PTPRU-205ENST00000460170 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 SPINK13Q1W4C9 94 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 MUC22E2RYF6 1773 aaPredicted RBP11.63□□□□□ -0.55
PTPRU-205ENST00000460170 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 GAGE12BA1L429 117 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 HLA-DMBP28068 263 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 COX8AP10176 69 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 SIGMAR1Q99720 223 aa11.63□□□□□ -0.55
PTPRU-205ENST00000460170 MAPK1IP1LQ8NDC0 245 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 UBE2E2Q96LR5 201 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 TP53TG1Q9Y2A0 90 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 KMT2EQ8IZD2 1858 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 M0R2P5 195 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 SP5Q6BEB4 398 aaPredicted RBP11.62□□□□□ -0.55
PTPRU-205ENST00000460170 ANAPC13Q9BS18 74 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 INS-IGF2F8WCM5 200 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 NPBQ8NG41 125 aa11.62□□□□□ -0.55
PTPRU-205ENST00000460170 IGHV3-53P01767 116 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 PRADC1Q9BSG0 188 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 MED12LQ86YW9 2145 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 NUPR1O60356 82 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 EGR2P11161 476 aaPredicted RBP11.61□□□□□ -0.55
PTPRU-205ENST00000460170 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 LY6G5BQ8NDX9 201 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 IGF2BP2-AS1Q96M15 143 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 AGPAT4-IT1Q9H0P7 198 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 C10orf142B7Z368 130 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
PTPRU-205ENST00000460170 PROP1O75360 226 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 MALP21145 153 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 IGLV1-47P01700 117 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 DLX4Q92988 240 aaPredicted RBP11.6□□□□□ -0.55
PTPRU-205ENST00000460170 SMIM2Q9BVW6 85 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 IGLV2-23P01705 113 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 OTOGLQ3ZCN5 2332 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 IGLV11-55A0A075B6I3 123 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 IGHV1OR15-1A0A075B7D0 117 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 CENPVL3A0A0U1RRI6 287 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 C1orf159Q96HA4 380 aa11.6□□□□□ -0.55
PTPRU-205ENST00000460170 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 IGHV7-4-1A0A0J9YVY3 117 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 SDHAF1A6NFY7 115 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 KIR2DL5AQ8N109 375 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 TIMM21Q9BVV7 248 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 KLK9Q9UKQ9 250 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
PTPRU-205ENST00000460170 SPXQ9BT56 116 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 C1QTNF4Q9BXJ3 329 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 BRWD1-AS2P59051 145 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 RASL10AQ92737 203 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 ZNF747Q9BV97 191 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 ARHGAP21Q5T5U3 1957 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 NCKAP5O14513 1909 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 KNCNA6PVL3 124 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 E7EUB6 86 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
PTPRU-205ENST00000460170 CUL9Q8IWT3 2517 aa11.59□□□□□ -0.55
PTPRU-205ENST00000460170 CDKN1BP46527 198 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 NPC2P61916 151 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 TMEM141Q96I45 108 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
PTPRU-205ENST00000460170 RHODO00212 210 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 TNCP24821 2201 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 CACNA1AO00555 2505 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 H3BUA1 57 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 LINC00158P58513 81 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 PMVKQ15126 192 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 ZNF295-AS1Q8N0V1 137 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
PTPRU-205ENST00000460170 CGB3P0DN86 165 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 CGB7P0DN87 165 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 TCTEX1D4Q5JR98 221 aa11.58□□□□□ -0.56
PTPRU-205ENST00000460170 CKS1BP61024 79 aa11.57□□□□□ -0.56
PTPRU-205ENST00000460170 MRPL53Q96EL3 112 aaKnown RBP11.57□□□□□ -0.56
PTPRU-205ENST00000460170 MRPL36Q9P0J6 103 aaKnown RBP11.57□□□□□ -0.56
PTPRU-205ENST00000460170 GOLGB1Q14789 3259 aaKnown RBP11.57□□□□□ -0.56
PTPRU-205ENST00000460170 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
PTPRU-205ENST00000460170 LINC01619G3V211 115 aa11.57□□□□□ -0.56
PTPRU-205ENST00000460170 J3QLI3 93 aa11.57□□□□□ -0.56
PTPRU-205ENST00000460170 NPSP0C0P6 89 aa11.57□□□□□ -0.56
PTPRU-205ENST00000460170 TRAV12-2A0A075B6T6 113 aa11.57□□□□□ -0.56
PTPRU-205ENST00000460170 CTSGP08311 255 aa11.57□□□□□ -0.56
PTPRU-205ENST00000460170 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms