RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MRPL32Q9BYC8 188 aaKnown RBP8.13□□□□□ -1.11
HERC4-207ENST00000460168 PRSS29PA6NIE9 313 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 A8MZ25 164 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 IFITM1P13164 125 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 MFAP2P55001 183 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 FAM159AQ6UWV7 190 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 SLC25A22Q9H936 323 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 SLC39A9Q9NUM3 307 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 IGKV1OR2-108A0A075B7D4 117 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 H3BUX3 64 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 ZNF415Q09FC8 603 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 STPG3Q8N7X2 389 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 PIFOQ8TCI5 191 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 NPIPB3Q92617 1050 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 MS4A6AQ9H2W1 248 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 MOB4Q9Y3A3 225 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 ITPR3Q14573 2671 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 HECTD1Q9ULT8 2610 aa8.12□□□□□ -1.11
HERC4-207ENST00000460168 IGHV3-21A0A0B4J1V1 117 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 ZNF785A8K8V0 405 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 ZNF324O75467 553 aaPredicted RBP8.11□□□□□ -1.11
HERC4-207ENST00000460168 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
HERC4-207ENST00000460168 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 LY6EQ16553 131 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 RASL11AQ6T310 242 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 ATOH7Q8N100 152 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 C5orf56Q8N8D9 126 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 SGMS2Q8NHU3 365 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 BORCS7Q96B45 105 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 PRADC1Q9BSG0 188 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 ZNF469Q96JG9 3925 aaPredicted RBP8.11□□□□□ -1.11
HERC4-207ENST00000460168 PDZD2O15018 2839 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 TEX15Q9BXT5 2789 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 BCL2P10415 239 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 GNG5P63218 68 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 WFDC2Q14508 124 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 ANXA2RQ3ZCQ2 193 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 PVRIGQ6DKI7 326 aa8.11□□□□□ -1.11
HERC4-207ENST00000460168 CTXND1A0A1B0GTU2 59 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 MDFIC2A0A1B0GVS7 189 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 SH2D7A6NKC9 451 aaPredicted RBP8.1□□□□□ -1.11
HERC4-207ENST00000460168 CIARTQ8N365 385 aaPredicted RBP8.1□□□□□ -1.11
HERC4-207ENST00000460168 RASL10AQ92737 203 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 SCRT2Q9NQ03 307 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 TECRQ9NZ01 308 aaKnown RBP8.1□□□□□ -1.11
HERC4-207ENST00000460168 TRAV9-1A0A075B6T8 112 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 A0A1W2PS18 150 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 ATP6V0E1O15342 81 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 CXorf1O96002 111 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 KIR3DS1Q14943 382 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 ECSCRQ19T08 205 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 ASPHD1Q5U4P2 390 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 MRPL36Q9P0J6 103 aaKnown RBP8.1□□□□□ -1.11
HERC4-207ENST00000460168 YTHDF2Q9Y5A9 579 aaKnown RBP8.1□□□□□ -1.11
HERC4-207ENST00000460168 SELENOKQ9Y6D0 94 aa8.1□□□□□ -1.11
HERC4-207ENST00000460168 PRR20EP86478 221 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 PRR20CP86479 221 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 PRR20DP86480 221 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 PRR20BP86481 221 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 PRR20AP86496 221 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 DEFB112Q30KQ8 113 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 TTC32Q5I0X7 151 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
HERC4-207ENST00000460168 FOXC2Q99958 501 aa8.09□□□□□ -1.11
HERC4-207ENST00000460168 TCRBV4S1A1TA0A5B7 111 aa8.09□□□□□ -1.12
HERC4-207ENST00000460168 EGR2P11161 476 aaPredicted RBP8.09□□□□□ -1.12
HERC4-207ENST00000460168 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.12
HERC4-207ENST00000460168 ZNF90Q03938 601 aa8.09□□□□□ -1.12
HERC4-207ENST00000460168 SAMD5Q5TGI4 173 aa8.09□□□□□ -1.12
HERC4-207ENST00000460168 LINC00477Q96M19 166 aa8.09□□□□□ -1.12
HERC4-207ENST00000460168 GNG13Q9P2W3 67 aa8.09□□□□□ -1.12
HERC4-207ENST00000460168 A0A087X0K7 114 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 I3L2K1 104 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 AMY1AP04745 511 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 GAGE2EQ4V326 116 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 SH2D6Q7Z4S9 175 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 THAP8Q8NA92 274 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 SMIM7Q9BQ49 75 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 TNFRSF19Q9NS68 423 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 GAGE2DQ9UEU5 116 aa8.08□□□□□ -1.12
HERC4-207ENST00000460168 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 A6NDX4 124 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 SYS1-DBNDD2H3BUS1 97 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 K7EIM0 57 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 INSL3P51460 131 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 ZNF355PQ9NSJ1 428 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 IGLV11-55A0A075B6I3 123 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 TMEM89A2RUT3 159 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 LINC01548A6NM66 108 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 FSHBP01225 129 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 IGHV4-59P01825 116 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 FHL3Q13643 280 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 LCN12Q6JVE5 192 aa8.07□□□□□ -1.12
HERC4-207ENST00000460168 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms