RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 HSPB11Q9Y547 144 aa15.72■□□□□ 0.11
PTPN4-207ENST00000460162 MPC2O95563 127 aa15.71■□□□□ 0.11
PTPN4-207ENST00000460162 KHDC3LQ587J8 217 aa15.71■□□□□ 0.11
PTPN4-207ENST00000460162 TP53TG3Q9ULZ0 132 aa15.71■□□□□ 0.11
PTPN4-207ENST00000460162 CDK2AP2O75956 126 aa15.7■□□□□ 0.1
PTPN4-207ENST00000460162 TAS2R45P59539 299 aa15.7■□□□□ 0.1
PTPN4-207ENST00000460162 ZNF415Q09FC8 603 aa15.7■□□□□ 0.1
PTPN4-207ENST00000460162 FFAR4Q5NUL3 377 aa15.7■□□□□ 0.1
PTPN4-207ENST00000460162 MRPL16Q9NX20 251 aaKnown RBP15.7■□□□□ 0.1
PTPN4-207ENST00000460162 SSNA1O43805 119 aa15.69■□□□□ 0.1
PTPN4-207ENST00000460162 RANP62826 216 aaKnown RBP15.69■□□□□ 0.1
PTPN4-207ENST00000460162 ZNF266Q14584 549 aa15.69■□□□□ 0.1
PTPN4-207ENST00000460162 Q6ZQT7 251 aa15.69■□□□□ 0.1
PTPN4-207ENST00000460162 ICOSQ9Y6W8 199 aa15.69■□□□□ 0.1
PTPN4-207ENST00000460162 HSPG2P98160 4391 aa15.69■□□□□ 0.1
PTPN4-207ENST00000460162 LRP1BQ9NZR2 4599 aa15.68■□□□□ 0.1
PTPN4-207ENST00000460162 A6NHS1 94 aa15.68■□□□□ 0.1
PTPN4-207ENST00000460162 IFNA5P01569 189 aa15.68■□□□□ 0.1
PTPN4-207ENST00000460162 DEFA1P59665 94 aa15.68■□□□□ 0.1
PTPN4-207ENST00000460162 DEFA3P59666 94 aa15.68■□□□□ 0.1
PTPN4-207ENST00000460162 PRO0255Q9UI72 69 aa15.68■□□□□ 0.1
PTPN4-207ENST00000460162 LENEPQ9Y5L5 61 aa15.68■□□□□ 0.1
PTPN4-207ENST00000460162 PAX4O43316 350 aa15.67■□□□□ 0.1
PTPN4-207ENST00000460162 RPL12P30050 165 aaKnown RBP15.67■□□□□ 0.1
PTPN4-207ENST00000460162 SLAQ13239 276 aa15.67■□□□□ 0.1
PTPN4-207ENST00000460162 SCGB1C1Q8TD33 95 aa15.67■□□□□ 0.1
PTPN4-207ENST00000460162 IGHV3-53P01767 116 aa15.66■□□□□ 0.1
PTPN4-207ENST00000460162 Q6AWC8 147 aa15.66■□□□□ 0.1
PTPN4-207ENST00000460162 SMIM3Q9BZL3 60 aa15.66■□□□□ 0.1
PTPN4-207ENST00000460162 MBD2Q9UBB5 411 aa15.66■□□□□ 0.1
PTPN4-207ENST00000460162 DIRC3C9JPN6 131 aa15.65■□□□□ 0.1
PTPN4-207ENST00000460162 SPATA12Q7Z6I5 190 aa15.65■□□□□ 0.1
PTPN4-207ENST00000460162 TMED6Q8WW62 240 aa15.65■□□□□ 0.1
PTPN4-207ENST00000460162 SIVA1O15304 175 aa15.64■□□□□ 0.09
PTPN4-207ENST00000460162 CRYBA4P53673 196 aa15.64■□□□□ 0.09
PTPN4-207ENST00000460162 MUC21Q5SSG8 566 aa15.64■□□□□ 0.09
PTPN4-207ENST00000460162 TRGV11A0A075B6L2 103 aa15.63■□□□□ 0.09
PTPN4-207ENST00000460162 LINC00315P59091 139 aa15.63■□□□□ 0.09
PTPN4-207ENST00000460162 OTORQ9NRC9 128 aa15.63■□□□□ 0.09
PTPN4-207ENST00000460162 NXPH4O95158 308 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 FHL2Q14192 279 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 MRPL23Q16540 153 aaKnown RBP15.62■□□□□ 0.09
PTPN4-207ENST00000460162 FAM74A1Q5RGS3 127 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 FAM159AQ6UWV7 190 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 PQLC2Q6ZP29 291 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 CMTM2Q8TAZ6 248 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 C8orf49Q96NF6 230 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 HHLA3Q9XRX5 114 aa15.62■□□□□ 0.09
PTPN4-207ENST00000460162 ACOT6Q3I5F7 207 aaPredicted RBP15.61■□□□□ 0.09
PTPN4-207ENST00000460162 HYLS1Q96M11 299 aa15.61■□□□□ 0.09
PTPN4-207ENST00000460162 SPXQ9BT56 116 aa15.61■□□□□ 0.09
PTPN4-207ENST00000460162 MDFICQ9P1T7 246 aa15.61■□□□□ 0.09
PTPN4-207ENST00000460162 TMEM183BQ1AE95 376 aa15.6■□□□□ 0.09
PTPN4-207ENST00000460162 TDRG1Q3Y452 100 aa15.6■□□□□ 0.09
PTPN4-207ENST00000460162 Q6ZRN7 208 aaPredicted RBP15.6■□□□□ 0.09
PTPN4-207ENST00000460162 TMEM183AQ8IXX5 376 aa15.6■□□□□ 0.09
PTPN4-207ENST00000460162 ARL6IP6Q8N6S5 226 aa15.6■□□□□ 0.09
PTPN4-207ENST00000460162 OR10G4Q8NGN3 311 aa15.6■□□□□ 0.09
PTPN4-207ENST00000460162 RASL10AQ92737 203 aa15.6■□□□□ 0.09
PTPN4-207ENST00000460162 KRTAP4-5Q9BYR2 181 aa15.6■□□□□ 0.09
PTPN4-207ENST00000460162 TRGV4A0A0C4DH28 118 aa15.59■□□□□ 0.09
PTPN4-207ENST00000460162 A0A1W2PPV4 95 aa15.59■□□□□ 0.09
PTPN4-207ENST00000460162 NEGR1Q7Z3B1 354 aa15.59■□□□□ 0.09
PTPN4-207ENST00000460162 IQCF2Q8IXL9 164 aa15.59■□□□□ 0.09
PTPN4-207ENST00000460162 WFDC1Q9HC57 220 aa15.59■□□□□ 0.09
PTPN4-207ENST00000460162 PGPA6NDG6 321 aa15.58■□□□□ 0.08
PTPN4-207ENST00000460162 EIF3GO75821 320 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTPN4-207ENST00000460162 MAPKAPK5-AS1Q8N8E1 139 aa15.58■□□□□ 0.08
PTPN4-207ENST00000460162 RPH3ALQ9UNE2 315 aa15.58■□□□□ 0.08
PTPN4-207ENST00000460162 APOBP04114 4563 aaKnown RBP15.57■□□□□ 0.08
PTPN4-207ENST00000460162 SFTA3P0C7M3 94 aa15.57■□□□□ 0.08
PTPN4-207ENST00000460162 KRTAP10-2P60368 255 aa15.57■□□□□ 0.08
PTPN4-207ENST00000460162 RAB2AP61019 212 aa15.57■□□□□ 0.08
PTPN4-207ENST00000460162 LYPD5Q6UWN5 251 aa15.57■□□□□ 0.08
PTPN4-207ENST00000460162 PCNPQ8WW12 178 aaKnown RBP15.57■□□□□ 0.08
PTPN4-207ENST00000460162 ZNF479Q96JC4 524 aa15.57■□□□□ 0.08
PTPN4-207ENST00000460162 NAGKQ9UJ70 344 aa15.57■□□□□ 0.08
PTPN4-207ENST00000460162 SRIP30626 198 aa15.56■□□□□ 0.08
PTPN4-207ENST00000460162 GOLT1AQ6ZVE7 132 aa15.56■□□□□ 0.08
PTPN4-207ENST00000460162 DNAH5Q8TE73 4624 aa15.56■□□□□ 0.08
PTPN4-207ENST00000460162 TRAV21A0A0B4J279 112 aa15.55■□□□□ 0.08
PTPN4-207ENST00000460162 K7EQD1 137 aa15.55■□□□□ 0.08
PTPN4-207ENST00000460162 ORM1P02763 201 aa15.55■□□□□ 0.08
PTPN4-207ENST00000460162 TRAV4A0A0B4J268 109 aa15.54■□□□□ 0.08
PTPN4-207ENST00000460162 OR10G9Q8NGN4 311 aa15.54■□□□□ 0.08
PTPN4-207ENST00000460162 OR10G7Q8NGN6 311 aa15.54■□□□□ 0.08
PTPN4-207ENST00000460162 IGHV3-16A0A0C4DH30 117 aa15.53■□□□□ 0.08
PTPN4-207ENST00000460162 F6UZH7 168 aa15.53■□□□□ 0.08
PTPN4-207ENST00000460162 CDC34P49427 236 aaPredicted RBP15.53■□□□□ 0.08
PTPN4-207ENST00000460162 OR2G3Q8NGZ4 309 aa15.53■□□□□ 0.08
PTPN4-207ENST00000460162 TREM1Q9NP99 234 aa15.53■□□□□ 0.08
PTPN4-207ENST00000460162 TRAV8-1A0A0A6YYK1 113 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 SERTM2A0A1B0GWG4 89 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 C9JCJ5 164 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 K7EP13 123 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 M0R2P5 195 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 ARL14EPLP0DKL9 152 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 GYPEP15421 78 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 GNG5P63218 68 aa15.52■□□□□ 0.08
PTPN4-207ENST00000460162 NFE4Q86UQ8 179 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms