RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
COL7A1-203ENST00000459756 IQCF2Q8IXL9 164 aa11.32□□□□□ -0.6
COL7A1-203ENST00000459756 EIF4E3Q8N5X7 224 aaKnown RBP11.32□□□□□ -0.6
COL7A1-203ENST00000459756 GAGE12BA1L429 117 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 GAGE7O76087 117 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
COL7A1-203ENST00000459756 FAM74A1Q5RGS3 127 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 PRR9Q5T870 116 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 C11orf72Q8NBR9 251 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 Q8TAT8 98 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 ACTR3CQ9C0K3 210 aaPredicted RBP11.31□□□□□ -0.6
COL7A1-203ENST00000459756 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
COL7A1-203ENST00000459756 RGS13O14921 159 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 NUDT3O95989 172 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 TPT1P13693 172 aaKnown RBP11.3□□□□□ -0.6
COL7A1-203ENST00000459756 NKX2-5P52952 324 aaPredicted RBP11.3□□□□□ -0.6
COL7A1-203ENST00000459756 LGALS9BQ3B8N2 356 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 CMTM2Q8TAZ6 248 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 LENEPQ9Y5L5 61 aa11.3□□□□□ -0.6
COL7A1-203ENST00000459756 IGHV1OR15-1A0A075B7D0 117 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 PGPA6NDG6 321 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 EIF5AP63241 154 aaKnown RBP11.29□□□□□ -0.6
COL7A1-203ENST00000459756 OR5I1Q13606 314 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 IBA57Q5T440 356 aaKnown RBP11.29□□□□□ -0.6
COL7A1-203ENST00000459756 Q6ZTI0 123 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 LINC00336Q6ZUF6 198 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 C9orf62Q8N4C0 152 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 TMED6Q8WW62 240 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 ATG101Q9BSB4 218 aa11.29□□□□□ -0.6
COL7A1-203ENST00000459756 HECTD4Q9Y4D8 3996 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 M0R2N4 97 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 TCL1AP56279 114 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 ZNF726P1Q15940 193 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 C18orf15Q96N68 181 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
COL7A1-203ENST00000459756 TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
COL7A1-203ENST00000459756 SEC11BP0C7V7 166 aa11.27□□□□□ -0.61
COL7A1-203ENST00000459756 HOXA5P20719 270 aa11.27□□□□□ -0.61
COL7A1-203ENST00000459756 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.61
COL7A1-203ENST00000459756 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
COL7A1-203ENST00000459756 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
COL7A1-203ENST00000459756 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.61
COL7A1-203ENST00000459756 DNAH2Q9P225 4427 aa11.27□□□□□ -0.61
COL7A1-203ENST00000459756 IGLV2-18A0A075B6J9 118 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 A0A1B0GV50 99 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 H3BNG1 76 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 GCHFRP30047 84 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 FHITP49789 147 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 CCL18P55774 89 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 Q6AWC8 147 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 Q6ZQT7 251 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 Q6ZR54 194 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 TP53TG3Q9ULZ0 132 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 KLF12Q9Y4X4 402 aa11.26□□□□□ -0.61
COL7A1-203ENST00000459756 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
COL7A1-203ENST00000459756 SPINK4O60575 86 aa11.25□□□□□ -0.61
COL7A1-203ENST00000459756 CXorf1O96002 111 aa11.25□□□□□ -0.61
COL7A1-203ENST00000459756 GOLT1AQ6ZVE7 132 aa11.25□□□□□ -0.61
COL7A1-203ENST00000459756 STOML3Q8TAV4 291 aa11.25□□□□□ -0.61
COL7A1-203ENST00000459756 SUN5Q8TC36 379 aa11.25□□□□□ -0.61
COL7A1-203ENST00000459756 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
COL7A1-203ENST00000459756 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
COL7A1-203ENST00000459756 SLC51BQ86UW2 128 aa11.24□□□□□ -0.61
COL7A1-203ENST00000459756 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
COL7A1-203ENST00000459756 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 A0A0J9YY99 117 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 SERTM2A0A1B0GWG4 89 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 UBE2G2P60604 165 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 FAM159AQ6UWV7 190 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 BOLA1Q9Y3E2 137 aa11.23□□□□□ -0.61
COL7A1-203ENST00000459756 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
COL7A1-203ENST00000459756 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
COL7A1-203ENST00000459756 RTL8CO15255 209 aa11.22□□□□□ -0.61
COL7A1-203ENST00000459756 GNG5P63218 68 aa11.22□□□□□ -0.61
COL7A1-203ENST00000459756 TDRG1Q3Y452 100 aa11.22□□□□□ -0.61
COL7A1-203ENST00000459756 SOHLH1Q5JUK2 328 aa11.22□□□□□ -0.61
COL7A1-203ENST00000459756 EIF5AL1Q6IS14 154 aaKnown RBP11.22□□□□□ -0.61
COL7A1-203ENST00000459756 LINC00588Q9Y4M8 146 aa11.22□□□□□ -0.61
COL7A1-203ENST00000459756 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
COL7A1-203ENST00000459756 K7EQM0 130 aa11.21□□□□□ -0.61
COL7A1-203ENST00000459756 TCRAP04437 139 aa11.21□□□□□ -0.61
COL7A1-203ENST00000459756 SFT2D1Q8WV19 159 aa11.21□□□□□ -0.61
COL7A1-203ENST00000459756 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
COL7A1-203ENST00000459756 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms