RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 P0DMU3 169 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
USP39-209ENST00000458268 Q6ZTI0 123 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 ZNF680Q8NEM1 530 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 OR11H4Q8NGC9 324 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 TMPRSS5Q9H3S3 457 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 CYTL1Q9NRR1 136 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
USP39-209ENST00000458268 NMBP08949 121 aa13.18□□□□□ -0.3
USP39-209ENST00000458268 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
USP39-209ENST00000458268 KCNRGQ8N5I3 272 aa13.18□□□□□ -0.3
USP39-209ENST00000458268 FAM210BQ96KR6 192 aa13.18□□□□□ -0.3
USP39-209ENST00000458268 ZNF471Q9BX82 626 aaPredicted RBP13.18□□□□□ -0.3
USP39-209ENST00000458268 KLF12Q9Y4X4 402 aa13.18□□□□□ -0.3
USP39-209ENST00000458268 TRGV2A0A075B6R0 118 aa13.17□□□□□ -0.3
USP39-209ENST00000458268 PFDN1O60925 122 aa13.17□□□□□ -0.3
USP39-209ENST00000458268 C5orf17Q8NAS9 161 aa13.17□□□□□ -0.3
USP39-209ENST00000458268 ST6GAL2Q96JF0 529 aa13.17□□□□□ -0.3
USP39-209ENST00000458268 A0A0J9YY99 117 aa13.16□□□□□ -0.3
USP39-209ENST00000458268 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
USP39-209ENST00000458268 IFNA7P01567 189 aa13.16□□□□□ -0.3
USP39-209ENST00000458268 NDFIP1Q9BT67 221 aa13.16□□□□□ -0.3
USP39-209ENST00000458268 TREM1Q9NP99 234 aa13.16□□□□□ -0.3
USP39-209ENST00000458268 MRPL16Q9NX20 251 aaKnown RBP13.16□□□□□ -0.3
USP39-209ENST00000458268 hCG_2014768A0A024R1R8 64 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 A0A1B0GV50 99 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 MAP1LC3B2A6NCE7 125 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 GGTLC3B5MD39 225 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 K7EQM0 130 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 TCRAP04437 139 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 ZNF345Q14585 488 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 ANXA2RQ3ZCQ2 193 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 FAM159AQ6UWV7 190 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 PRNTQ86SH4 94 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 TMEM183AQ8IXX5 376 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 POM121L12Q8N7R1 296 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 ATG101Q9BSB4 218 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 MAP1LC3BQ9GZQ8 125 aa13.15□□□□□ -0.3
USP39-209ENST00000458268 A0A0D9SG52 128 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 TRBV7-9A0A0J9YWB2 115 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 HMSDA8MTL9 139 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 M0R2N4 97 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 BCL2L11O43521 198 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 TCL1AP56279 114 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 C15orf53Q8NAA6 179 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 LINC00467Q9BRT7 94 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 LENEPQ9Y5L5 61 aa13.14□□□□□ -0.31
USP39-209ENST00000458268 IGLV2-18A0A075B6J9 118 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 TRAV26-1A0A087WT03 109 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 FHITP49789 147 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 DAZ2Q13117 558 aaKnown RBP13.13□□□□□ -0.31
USP39-209ENST00000458268 FAM213BQ8TBF2 198 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 TMED6Q8WW62 240 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 C8orf49Q96NF6 230 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 EPDR1Q9UM22 224 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
USP39-209ENST00000458268 Q6AWC8 147 aa13.12□□□□□ -0.31
USP39-209ENST00000458268 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
USP39-209ENST00000458268 SUN5Q8TC36 379 aa13.12□□□□□ -0.31
USP39-209ENST00000458268 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 TRAV34A0A0B4J273 112 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 TRAV21A0A0B4J279 112 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 SERTM2A0A1B0GWG4 89 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 HOXA5P20719 270 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 FLI1Q01543 452 aaPredicted RBP13.11□□□□□ -0.31
USP39-209ENST00000458268 IBA57Q5T440 356 aaKnown RBP13.11□□□□□ -0.31
USP39-209ENST00000458268 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 LINC00612Q8N6U2 182 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 STOML3Q8TAV4 291 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
USP39-209ENST00000458268 A0A1W2PRE2 83 aa13.1□□□□□ -0.31
USP39-209ENST00000458268 ZFP69Q49AA0 526 aa13.1□□□□□ -0.31
USP39-209ENST00000458268 ARL6IP6Q8N6S5 226 aa13.1□□□□□ -0.31
USP39-209ENST00000458268 LINC00479Q96M42 142 aa13.1□□□□□ -0.31
USP39-209ENST00000458268 GNRH2O43555 120 aa13.09□□□□□ -0.31
USP39-209ENST00000458268 SPINK4O60575 86 aa13.09□□□□□ -0.31
USP39-209ENST00000458268 GCGP01275 180 aa13.09□□□□□ -0.31
USP39-209ENST00000458268 CST9LP1Q5W188 147 aa13.09□□□□□ -0.31
USP39-209ENST00000458268 NACAE9PAV3 2078 aa13.09□□□□□ -0.31
USP39-209ENST00000458268 FAM74A7A6NL05 159 aa13.08□□□□□ -0.32
USP39-209ENST00000458268 PEX7O00628 323 aa13.08□□□□□ -0.32
USP39-209ENST00000458268 SEC11BP0C7V7 166 aa13.08□□□□□ -0.32
USP39-209ENST00000458268 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.32
USP39-209ENST00000458268 TMEM75Q8N9X5 138 aa13.08□□□□□ -0.32
USP39-209ENST00000458268 SFT2D1Q8WV19 159 aa13.08□□□□□ -0.32
USP39-209ENST00000458268 SDF2L1Q9HCN8 221 aa13.08□□□□□ -0.32
USP39-209ENST00000458268 KMT2AQ03164 3969 aa13.07□□□□□ -0.32
USP39-209ENST00000458268 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
USP39-209ENST00000458268 PPT1P50897 306 aa13.07□□□□□ -0.32
USP39-209ENST00000458268 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
USP39-209ENST00000458268 IGLV2-11P01706 119 aa13.06□□□□□ -0.32
USP39-209ENST00000458268 TYMSP04818 313 aa13.06□□□□□ -0.32
USP39-209ENST00000458268 SMUG1Q53HV7 270 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms