RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 UBE2DNLQ8IWF7 75 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 TMED6Q8WW62 240 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 CYTL1Q9NRR1 136 aa12.79□□□□□ -0.36
PDLIM2-215ENST00000456545 ALMS1Q8TCU4 4167 aa12.78□□□□□ -0.36
PDLIM2-215ENST00000456545 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
PDLIM2-215ENST00000456545 ANXA2RQ3ZCQ2 193 aa12.78□□□□□ -0.36
PDLIM2-215ENST00000456545 C5orf17Q8NAS9 161 aa12.78□□□□□ -0.36
PDLIM2-215ENST00000456545 NDFIP1Q9BT67 221 aa12.78□□□□□ -0.36
PDLIM2-215ENST00000456545 PFDN1O60925 122 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 DAZ2Q13117 558 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 OR5I1Q13606 314 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 MUC21Q5SSG8 566 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 FAM159AQ6UWV7 190 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 SSX7Q7RTT5 188 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 C15orf53Q8NAA6 179 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 OR11H4Q8NGC9 324 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 ZNF471Q9BX82 626 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 TREM1Q9NP99 234 aa12.77□□□□□ -0.37
PDLIM2-215ENST00000456545 TRGV2A0A075B6R0 118 aa12.76□□□□□ -0.37
PDLIM2-215ENST00000456545 IFNA7P01567 189 aa12.76□□□□□ -0.37
PDLIM2-215ENST00000456545 FGF8P55075 233 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-215ENST00000456545 EIF5AP63241 154 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-215ENST00000456545 STOML3Q8TAV4 291 aa12.76□□□□□ -0.37
PDLIM2-215ENST00000456545 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
PDLIM2-215ENST00000456545 NAGKQ9UJ70 344 aa12.76□□□□□ -0.37
PDLIM2-215ENST00000456545 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 TRAV8-1A0A0A6YYK1 113 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 A0A1W2PRE2 83 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 NUDT3O95989 172 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 TCRAP04437 139 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 UBE2G2P60604 165 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 ZNF726P1Q15940 193 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 Q6ZQT7 251 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 TMPRSS5Q9H3S3 457 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 TP53TG3Q9ULZ0 132 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 EPDR1Q9UM22 224 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 KLF12Q9Y4X4 402 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 HYDINQ4G0P3 5121 aa12.75□□□□□ -0.37
PDLIM2-215ENST00000456545 MAP1LC3B2A6NCE7 125 aa12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 BCL2L11O43521 198 aa12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 ZNF415Q09FC8 603 aa12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 IBA57Q5T440 356 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 Q6AWC8 147 aa12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 Q6ZTI0 123 aa12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 MAP1LC3BQ9GZQ8 125 aa12.74□□□□□ -0.37
PDLIM2-215ENST00000456545 TRAV21A0A0B4J279 112 aa12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 SEC11BP0C7V7 166 aa12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 TCL1AP56279 114 aa12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 TMUB2Q71RG4 321 aa12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 CYB561D1Q8N8Q1 229 aa12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 C11orf72Q8NBR9 251 aa12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 NKX6-2Q9C056 277 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 PSG8Q9UQ74 426 aa12.73□□□□□ -0.37
PDLIM2-215ENST00000456545 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 F6UZH7 168 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 FLI1Q01543 452 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 TMEM183BQ1AE95 376 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 PRNTQ86SH4 94 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 TMEM183AQ8IXX5 376 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 LINC00612Q8N6U2 182 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 DNAH1Q9P2D7 4330 aa12.72□□□□□ -0.37
PDLIM2-215ENST00000456545 FBLL1A6NHQ2 334 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-215ENST00000456545 UMAD1C9J7I0 102 aa12.71□□□□□ -0.37
PDLIM2-215ENST00000456545 PPT1P50897 306 aa12.71□□□□□ -0.37
PDLIM2-215ENST00000456545 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
PDLIM2-215ENST00000456545 FAM213BQ8TBF2 198 aa12.71□□□□□ -0.37
PDLIM2-215ENST00000456545 SPINK4O60575 86 aa12.7□□□□□ -0.38
PDLIM2-215ENST00000456545 TPT1P13693 172 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-215ENST00000456545 RNF212Q495C1 297 aa12.7□□□□□ -0.38
PDLIM2-215ENST00000456545 TVP23CQ96ET8 276 aa12.7□□□□□ -0.38
PDLIM2-215ENST00000456545 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
PDLIM2-215ENST00000456545 MRPL16Q9NX20 251 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-215ENST00000456545 TRAV26-1A0A087WT03 109 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 A0A0J9YY99 117 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 FHITP49789 147 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 SMUG1Q53HV7 270 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 SAPCD1Q5SSQ6 148 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 CST9LP1Q5W188 147 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 Q6ZNX1 250 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 SFT2D1Q8WV19 159 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 SPXQ9BT56 116 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 SDF2L1Q9HCN8 221 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 MDFICQ9P1T7 246 aa12.69□□□□□ -0.38
PDLIM2-215ENST00000456545 FAM74A7A6NL05 159 aa12.68□□□□□ -0.38
PDLIM2-215ENST00000456545 GCGP01275 180 aa12.68□□□□□ -0.38
PDLIM2-215ENST00000456545 HIST1H2BAQ96A08 127 aa12.68□□□□□ -0.38
PDLIM2-215ENST00000456545 C8orf49Q96NF6 230 aa12.68□□□□□ -0.38
PDLIM2-215ENST00000456545 hCG_2014768A0A024R1R8 64 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 TRAV34A0A0B4J273 112 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 A0A1B0GV50 99 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 PEX7O00628 323 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 GNRH2O43555 120 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms