RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 Q6ZNX1 250 aa12.25□□□□□ -0.45
USP39-208ENST00000455732 GOLT1AQ6ZVE7 132 aa12.25□□□□□ -0.45
USP39-208ENST00000455732 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 CBY3A6NI87 242 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 GGTLC3B5MD39 225 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 HTN3P15516 51 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 GNG5P63218 68 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 Q6AWC8 147 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 RPH3ALQ9UNE2 315 aa12.24□□□□□ -0.45
USP39-208ENST00000455732 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
USP39-208ENST00000455732 KANTRA0A1W2PQU2 76 aa12.23□□□□□ -0.45
USP39-208ENST00000455732 TCRAP04437 139 aa12.23□□□□□ -0.45
USP39-208ENST00000455732 ATP5G1P05496 136 aa12.23□□□□□ -0.45
USP39-208ENST00000455732 SEC11BP0C7V7 166 aa12.23□□□□□ -0.45
USP39-208ENST00000455732 ATP5G3P48201 142 aa12.23□□□□□ -0.45
USP39-208ENST00000455732 IBA57Q5T440 356 aaKnown RBP12.23□□□□□ -0.45
USP39-208ENST00000455732 TCTE3Q8IZS6 198 aa12.23□□□□□ -0.45
USP39-208ENST00000455732 RGS13O14921 159 aa12.22□□□□□ -0.45
USP39-208ENST00000455732 TCL1AP56279 114 aa12.22□□□□□ -0.45
USP39-208ENST00000455732 TMEM88Q6PEY1 159 aa12.22□□□□□ -0.45
USP39-208ENST00000455732 Q6ZQT7 251 aa12.22□□□□□ -0.45
USP39-208ENST00000455732 IQCF2Q8IXL9 164 aa12.22□□□□□ -0.45
USP39-208ENST00000455732 ZNF471Q9BX82 626 aaPredicted RBP12.22□□□□□ -0.45
USP39-208ENST00000455732 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.45
USP39-208ENST00000455732 MAP1LC3B2A6NCE7 125 aa12.21□□□□□ -0.45
USP39-208ENST00000455732 UMAD1C9J7I0 102 aa12.21□□□□□ -0.45
USP39-208ENST00000455732 K7EQM0 130 aa12.21□□□□□ -0.45
USP39-208ENST00000455732 SUMO1P63165 101 aaKnown RBP12.21□□□□□ -0.45
USP39-208ENST00000455732 EIF5AP63241 154 aaKnown RBP12.21□□□□□ -0.45
USP39-208ENST00000455732 MAP1LC3BQ9GZQ8 125 aa12.21□□□□□ -0.45
USP39-208ENST00000455732 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.45
USP39-208ENST00000455732 EPDR1Q9UM22 224 aa12.21□□□□□ -0.45
USP39-208ENST00000455732 FBLL1A6NHQ2 334 aaKnown RBP12.2□□□□□ -0.46
USP39-208ENST00000455732 P0DMU3 169 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 CYB561D1Q8N8Q1 229 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 TVP23CQ96ET8 276 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 C18orf15Q96N68 181 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 ATG101Q9BSB4 218 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 NKX6-2Q9C056 277 aaPredicted RBP12.2□□□□□ -0.46
USP39-208ENST00000455732 TMPRSS5Q9H3S3 457 aa12.2□□□□□ -0.46
USP39-208ENST00000455732 NACAE9PAV3 2078 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 FGF8P55075 233 aaPredicted RBP12.19□□□□□ -0.46
USP39-208ENST00000455732 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 NDFIP1Q9BT67 221 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 TREM1Q9NP99 234 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
USP39-208ENST00000455732 GAGE12BA1L429 117 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 FAM74A7A6NL05 159 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 F5H768 121 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 SPINK4O60575 86 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 PFDN1O60925 122 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 GAGE7O76087 117 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 GAGE12FP0CL80 117 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 GAGE12GP0CL81 117 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 GAGE12IP0CL82 117 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 TPT1P13693 172 aaKnown RBP12.18□□□□□ -0.46
USP39-208ENST00000455732 FHITP49789 147 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 Q6ZTI0 123 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 KLF12Q9Y4X4 402 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 ARL2-SNX15V9GYD0 113 aa12.18□□□□□ -0.46
USP39-208ENST00000455732 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
USP39-208ENST00000455732 C1QBP02746 253 aa12.17□□□□□ -0.46
USP39-208ENST00000455732 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
USP39-208ENST00000455732 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
USP39-208ENST00000455732 LGALS9BQ3B8N2 356 aa12.17□□□□□ -0.46
USP39-208ENST00000455732 FAM159AQ6UWV7 190 aa12.17□□□□□ -0.46
USP39-208ENST00000455732 POM121L12Q8N7R1 296 aa12.17□□□□□ -0.46
USP39-208ENST00000455732 PSG8Q9UQ74 426 aa12.17□□□□□ -0.46
USP39-208ENST00000455732 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 F6UZH7 168 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 UBE2G2P60604 165 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 MUC21Q5SSG8 566 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 MBD3L1Q8WWY6 194 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 HIST1H2BAQ96A08 127 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 SGK494Q96LW2 274 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 TCEAL7Q9BRU2 100 aa12.16□□□□□ -0.46
USP39-208ENST00000455732 TRGV1A0A0A0MS02 117 aa12.15□□□□□ -0.46
USP39-208ENST00000455732 IFNA7P01567 189 aa12.15□□□□□ -0.46
USP39-208ENST00000455732 LGALSLQ3ZCW2 172 aaPredicted RBP12.15□□□□□ -0.46
USP39-208ENST00000455732 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.46
USP39-208ENST00000455732 PEX7O00628 323 aa12.14□□□□□ -0.47
USP39-208ENST00000455732 SAPCD1Q5SSQ6 148 aa12.14□□□□□ -0.47
USP39-208ENST00000455732 HECTD4Q9Y4D8 3996 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 HOXA5P20719 270 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 PPT1P50897 306 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 RNF212Q495C1 297 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 ZFP69Q49AA0 526 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 PRNTQ86SH4 94 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 AKAP14Q86UN6 197 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms