RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 GREB1Q4ZG55 1949 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 SCN1AP35498 2009 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 HEATR5AQ86XA9 2040 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 MAGI2Q86UL8 1455 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 IFT140Q96RY7 1462 aa2.83□□□□□ -1.96
HMGB3P21-201ENST00000452483 ARAP2Q8WZ64 1704 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 TRPM3Q9HCF6 1732 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 NYNRINQ9P2P1 1898 aaKnown RBP2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 TNRC6AQ8NDV7 1962 aaKnown RBP2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 TRAV1-1A0A0B4J248 108 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGHV1-18A0A0C4DH31 117 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 B4DSR2 109 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 ZNF861PO60384 105 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 WISP3O95389 354 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 NMBP08949 121 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 DEFA5Q01523 94 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 INSL4Q14641 139 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 LPAL2Q16609 132 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 SPANXN1Q5VSR9 72 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 SLC25A26Q70HW3 274 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 HMGN2P46Q86SG4 172 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 Q8N8P6 123 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 ST20-AS1Q8NBB2 130 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 OR8B2Q96RD0 313 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 CXCL16Q9H2A7 254 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 SMCO4Q9NRQ5 59 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 UQCR10Q9UDW1 63 aa2.82□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGKV1D-42A0A075B6H8 117 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGLV4-69A0A075B6H9 119 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 TRAV14DV4A0A0A6YYC5 116 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 C5orf67F2Z3F1 127 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 CISD3P0C7P0 127 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 SLC25A6P12236 298 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 RPL26P61254 145 aaKnown RBP2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 RBM3P98179 157 aaKnown RBP2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 SPANXN5Q5MJ07 72 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 FAM19A2Q8N3H0 131 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 KLF14Q8TD94 323 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 DYNLRB2Q8TF09 96 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 MUCL1Q96DR8 90 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 ABCC5O15440 1437 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 CPSF1Q10570 1443 aaKnown RBP2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 ERVK-7P63135 1459 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 CHD3Q12873 2000 aaKnown RBP2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 CABIN1Q9Y6J0 2220 aa2.81□□□□□ -1.96
HMGB3P21-201ENST00000452483 AGRNO00468 2067 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 MCM3APO60318 1980 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 SCAF11Q99590 1463 aaKnown RBP2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 CLIP1P30622 1438 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 C10orf71Q711Q0 1435 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 C16orf90A8MZG2 172 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 SFT2D2O95562 160 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 FAUP35544 74 aaKnown RBP2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 SSR2P43308 183 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 POLR2JP52435 117 aaKnown RBP2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 TDRG1Q3Y452 100 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 RPL7L1Q6DKI1 246 aaKnown RBP2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 CASC2Q6XLA1 102 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 LYPD6Q86Y78 171 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 Q8NAQ8 132 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 S100A16Q96FQ6 103 aaKnown RBP2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 REG4Q9BYZ8 158 aa2.8□□□□□ -1.96
HMGB3P21-201ENST00000452483 PLXNA3P51805 1871 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 ZSWIM8A7E2V4 1837 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 ABCA3Q99758 1704 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 ROBO1Q9Y6N7 1651 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 A0A1B0GU33 70 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 A6NIN4 97 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 PDCD5O14737 125 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 GAS8-AS1O95177 125 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGKCP01834 107 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 C14orf177Q52M58 125 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 Q6ZR54 194 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 ARPINQ7Z6K5 226 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 C15orf53Q8NAA6 179 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 PSME4Q14997 1843 aa2.79□□□□□ -1.96
HMGB3P21-201ENST00000452483 PXDNLA1KZ92 1463 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 CCDC88BA6NC98 1476 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 MYLKQ15746 1914 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 PARP14Q460N5 1801 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 KIF20BQ96Q89 1820 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGKV3D-15A0A087WSY6 115 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 IGLC7A0M8Q6 106 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 ATOX1O00244 68 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 BAALC-AS2P0C853 105 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 ADCYAP1P18509 176 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 CBLN1P23435 193 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 KRTDAPP60985 99 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 ZNF345Q14585 488 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 ADIRFQ15847 76 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 TMEM136Q6ZRR5 245 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 COMMD6Q7Z4G1 85 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 LINC00269Q8N2A0 174 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 FAM213BQ8TBF2 198 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 TMEM254Q8TBM7 123 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 TMEM141Q96I45 108 aa2.78□□□□□ -1.96
HMGB3P21-201ENST00000452483 NDUFA12Q9UI09 145 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms