RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 UBE2L3P68036 154 aaKnown RBP8.54□□□□□ -1.04
MSH5-209ENST00000450148 TNP2Q05952 138 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 ZNF266Q14584 549 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 KHDC3LQ587J8 217 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 C6orf223Q8N319 242 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 SCGB1C1Q8TD33 95 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 Q9H8V8 135 aa8.54□□□□□ -1.04
MSH5-209ENST00000450148 RGS13O14921 159 aa8.53□□□□□ -1.04
MSH5-209ENST00000450148 CSN1S1P47710 185 aa8.53□□□□□ -1.04
MSH5-209ENST00000450148 TAS2R45P59539 299 aa8.53□□□□□ -1.04
MSH5-209ENST00000450148 RAB2AP61019 212 aa8.53□□□□□ -1.04
MSH5-209ENST00000450148 Q6AWC8 147 aa8.53□□□□□ -1.04
MSH5-209ENST00000450148 ZNF575Q86XF7 245 aa8.53□□□□□ -1.04
MSH5-209ENST00000450148 MRPS16Q9Y3D3 137 aaKnown RBP8.53□□□□□ -1.04
MSH5-209ENST00000450148 LENEPQ9Y5L5 61 aa8.53□□□□□ -1.04
MSH5-209ENST00000450148 TRGV2A0A075B6R0 118 aa8.52□□□□□ -1.05
MSH5-209ENST00000450148 ACOT6Q3I5F7 207 aaPredicted RBP8.52□□□□□ -1.05
MSH5-209ENST00000450148 TMED6Q8WW62 240 aa8.52□□□□□ -1.05
MSH5-209ENST00000450148 ST6GAL2Q96JF0 529 aa8.52□□□□□ -1.05
MSH5-209ENST00000450148 OTORQ9NRC9 128 aa8.52□□□□□ -1.05
MSH5-209ENST00000450148 MRPL16Q9NX20 251 aaKnown RBP8.52□□□□□ -1.05
MSH5-209ENST00000450148 PGPA6NDG6 321 aa8.51□□□□□ -1.05
MSH5-209ENST00000450148 Q5BKY6 102 aa8.51□□□□□ -1.05
MSH5-209ENST00000450148 MUC21Q5SSG8 566 aa8.51□□□□□ -1.05
MSH5-209ENST00000450148 PQLC2Q6ZP29 291 aa8.51□□□□□ -1.05
MSH5-209ENST00000450148 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
MSH5-209ENST00000450148 MDFICQ9P1T7 246 aa8.51□□□□□ -1.05
MSH5-209ENST00000450148 HMGB3O15347 200 aaKnown RBP8.5□□□□□ -1.05
MSH5-209ENST00000450148 PTTG1O95997 202 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 ZNF415Q09FC8 603 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 FHL2Q14192 279 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 ARL6IP6Q8N6S5 226 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 OR10G4Q8NGN3 311 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 OR10G9Q8NGN4 311 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 OR10G7Q8NGN6 311 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 OR2G3Q8NGZ4 309 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 HYLS1Q96M11 299 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 AQP10Q96PS8 301 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 ARPC5LQ9BPX5 153 aa8.5□□□□□ -1.05
MSH5-209ENST00000450148 A0A1W2PPV4 95 aa8.49□□□□□ -1.05
MSH5-209ENST00000450148 IGHV3-53P01767 116 aa8.49□□□□□ -1.05
MSH5-209ENST00000450148 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
MSH5-209ENST00000450148 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
MSH5-209ENST00000450148 CRYBA4P53673 196 aa8.49□□□□□ -1.05
MSH5-209ENST00000450148 TDRG1Q3Y452 100 aa8.49□□□□□ -1.05
MSH5-209ENST00000450148 SUN5Q8TC36 379 aa8.49□□□□□ -1.05
MSH5-209ENST00000450148 PSMG3Q9BT73 122 aaPredicted RBP8.49□□□□□ -1.05
MSH5-209ENST00000450148 TRAV8-1A0A0A6YYK1 113 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 A0A1W2PPQ1 181 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 PAX4O43316 350 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 ARL14EPLP0DKL9 152 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 ATP6V0CP27449 155 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 CDC34P49427 236 aaPredicted RBP8.48□□□□□ -1.05
MSH5-209ENST00000450148 GNG5P63218 68 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 TMEM183BQ1AE95 376 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 TMEM183AQ8IXX5 376 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 HSD17B11Q8NBQ5 300 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 RASL10AQ92737 203 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 MED28Q9H204 178 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 PRO0255Q9UI72 69 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 RPH3ALQ9UNE2 315 aa8.48□□□□□ -1.05
MSH5-209ENST00000450148 RNF222A6NCQ9 220 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 FAM74A1Q5RGS3 127 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 IQCF2Q8IXL9 164 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 CMTM2Q8TAZ6 248 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 ZNF479Q96JC4 524 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 C8orf49Q96NF6 230 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 SPXQ9BT56 116 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 HHLA3Q9XRX5 114 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 ICOSQ9Y6W8 199 aa8.47□□□□□ -1.05
MSH5-209ENST00000450148 TRGV11A0A075B6L2 103 aa8.46□□□□□ -1.06
MSH5-209ENST00000450148 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.06
MSH5-209ENST00000450148 F6UZH7 168 aa8.46□□□□□ -1.06
MSH5-209ENST00000450148 GNRH2O43555 120 aa8.46□□□□□ -1.06
MSH5-209ENST00000450148 GIPP09681 153 aaPredicted RBP8.46□□□□□ -1.06
MSH5-209ENST00000450148 SLAQ13239 276 aa8.46□□□□□ -1.06
MSH5-209ENST00000450148 FAM159AQ6UWV7 190 aa8.46□□□□□ -1.06
MSH5-209ENST00000450148 Q6ZRN7 208 aaPredicted RBP8.46□□□□□ -1.06
MSH5-209ENST00000450148 SH3BGRL3Q9H299 93 aa8.46□□□□□ -1.06
MSH5-209ENST00000450148 TRAV21A0A0B4J279 112 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 G3V3Q6 166 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 IGLV2-11P01706 119 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 TYMSP04818 313 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 BTF3P20290 206 aaKnown RBP8.45□□□□□ -1.06
MSH5-209ENST00000450148 GCHFRP30047 84 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 ZNF80P51504 273 aaPredicted RBP8.45□□□□□ -1.06
MSH5-209ENST00000450148 SERF2P84101 59 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 LYPD5Q6UWN5 251 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 SGK494Q96LW2 274 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 TREM1Q9NP99 234 aa8.45□□□□□ -1.06
MSH5-209ENST00000450148 RYR1P21817 5038 aa8.44□□□□□ -1.06
MSH5-209ENST00000450148 GGTLC3B5MD39 225 aa8.44□□□□□ -1.06
MSH5-209ENST00000450148 SIVA1O15304 175 aa8.44□□□□□ -1.06
MSH5-209ENST00000450148 NXPH4O95158 308 aa8.44□□□□□ -1.06
MSH5-209ENST00000450148 TCRAP04437 139 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms