RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 M0R2Z0 102 aa14.38□□□□□ -0.11
SGCE-207ENST00000447873 GCGP01275 180 aa14.38□□□□□ -0.11
SGCE-207ENST00000447873 RPL35AP18077 110 aaKnown RBP14.38□□□□□ -0.11
SGCE-207ENST00000447873 NUTF2P61970 127 aaKnown RBP14.38□□□□□ -0.11
SGCE-207ENST00000447873 OR5I1Q13606 314 aa14.38□□□□□ -0.11
SGCE-207ENST00000447873 COX8CQ7Z4L0 72 aa14.38□□□□□ -0.11
SGCE-207ENST00000447873 ZFAND2AQ8N6M9 145 aa14.38□□□□□ -0.11
SGCE-207ENST00000447873 BIN3Q9NQY0 253 aa14.38□□□□□ -0.11
SGCE-207ENST00000447873 M0R036 132 aa14.37□□□□□ -0.11
SGCE-207ENST00000447873 FXYD7P58549 80 aa14.37□□□□□ -0.11
SGCE-207ENST00000447873 TUBA4BQ9H853 241 aa14.37□□□□□ -0.11
SGCE-207ENST00000447873 DNAH3Q8TD57 4116 aa14.36□□□□□ -0.11
SGCE-207ENST00000447873 KLLNB2CW77 178 aa14.36□□□□□ -0.11
SGCE-207ENST00000447873 PRR9Q5T870 116 aa14.36□□□□□ -0.11
SGCE-207ENST00000447873 SVBPQ8N300 66 aa14.36□□□□□ -0.11
SGCE-207ENST00000447873 RNASE4P34096 147 aaKnown RBP14.35□□□□□ -0.11
SGCE-207ENST00000447873 KIR3DS1Q14943 382 aa14.35□□□□□ -0.11
SGCE-207ENST00000447873 ISOC2Q96AB3 205 aa14.35□□□□□ -0.11
SGCE-207ENST00000447873 TRAV12-2A0A075B6T6 113 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 S100A1P23297 94 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 ZNF80P51504 273 aaPredicted RBP14.34□□□□□ -0.11
SGCE-207ENST00000447873 FAM162BQ5T6X4 162 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 KPRPQ5T749 579 aaPredicted RBP14.34□□□□□ -0.11
SGCE-207ENST00000447873 DAZAP1Q96EP5 407 aaKnown RBP14.34□□□□□ -0.11
SGCE-207ENST00000447873 IGHV4-30-4P0DP06 118 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 CRIP1P50238 77 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 ERVFC1-1P60608 527 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 BTN1A1Q13410 526 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 GFI1BQ5VTD9 330 aa14.34□□□□□ -0.11
SGCE-207ENST00000447873 LINC00322Q6ZN03 302 aaPredicted RBP14.34□□□□□ -0.11
SGCE-207ENST00000447873 DNHD1Q96M86 4753 aa14.33□□□□□ -0.12
SGCE-207ENST00000447873 LOC102724200A0A096LPH7 203 aaPredicted RBP14.33□□□□□ -0.12
SGCE-207ENST00000447873 FABP5P3A8MUU1 101 aa14.33□□□□□ -0.12
SGCE-207ENST00000447873 SNAPINO95295 136 aa14.33□□□□□ -0.12
SGCE-207ENST00000447873 PFN1P07737 140 aaKnown RBP14.33□□□□□ -0.12
SGCE-207ENST00000447873 MORN3Q6PF18 240 aaPredicted RBP14.33□□□□□ -0.12
SGCE-207ENST00000447873 RNASE7Q9H1E1 156 aaKnown RBP14.33□□□□□ -0.12
SGCE-207ENST00000447873 C7orf71A4D174 169 aa14.32□□□□□ -0.12
SGCE-207ENST00000447873 SH2D1AO60880 128 aa14.32□□□□□ -0.12
SGCE-207ENST00000447873 AMBPP02760 352 aa14.32□□□□□ -0.12
SGCE-207ENST00000447873 IBA57Q5T440 356 aaKnown RBP14.32□□□□□ -0.12
SGCE-207ENST00000447873 CLRN3Q8NCR9 226 aa14.32□□□□□ -0.12
SGCE-207ENST00000447873 SFRP2Q96HF1 295 aa14.32□□□□□ -0.12
SGCE-207ENST00000447873 XCL2Q9UBD3 114 aa14.32□□□□□ -0.12
SGCE-207ENST00000447873 TRAV12-3A0A0B4J271 114 aa14.31□□□□□ -0.12
SGCE-207ENST00000447873 TRAV21A0A0B4J279 112 aa14.31□□□□□ -0.12
SGCE-207ENST00000447873 B4DEV8 164 aa14.31□□□□□ -0.12
SGCE-207ENST00000447873 CRXO43186 299 aaPredicted RBP14.31□□□□□ -0.12
SGCE-207ENST00000447873 Q6AWC8 147 aa14.31□□□□□ -0.12
SGCE-207ENST00000447873 C19orf71A6NCJ1 209 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 FAM231DQ6ZW35 169 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 C15orf54Q8N8G6 183 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 NUDT10Q8NFP7 164 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 NUDT11Q96G61 164 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 C1QTNF4Q9BXJ3 329 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 CSTL1Q9H114 145 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 CA1P00915 261 aaPredicted RBP14.3□□□□□ -0.12
SGCE-207ENST00000447873 INSP01308 110 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 P01737 135 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 MT-ND4LP03901 98 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 Q6ZQT7 251 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 OR10G8Q8NGN5 311 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 OSTCQ9NRP0 149 aa14.3□□□□□ -0.12
SGCE-207ENST00000447873 PRB2P02812 416 aaPredicted RBP14.29□□□□□ -0.12
SGCE-207ENST00000447873 RHEBQ15382 184 aa14.29□□□□□ -0.12
SGCE-207ENST00000447873 RNF212Q495C1 297 aa14.29□□□□□ -0.12
SGCE-207ENST00000447873 C7orf77A4D0Y5 90 aa14.28□□□□□ -0.12
SGCE-207ENST00000447873 ZNF705GA8MUZ8 300 aaPredicted RBP14.28□□□□□ -0.12
SGCE-207ENST00000447873 A8MZ25 164 aa14.28□□□□□ -0.12
SGCE-207ENST00000447873 ZNF324O75467 553 aaPredicted RBP14.28□□□□□ -0.12
SGCE-207ENST00000447873 ORM1P02763 201 aa14.28□□□□□ -0.12
SGCE-207ENST00000447873 GIG44P09565 113 aaPredicted RBP14.28□□□□□ -0.12
SGCE-207ENST00000447873 APOC4P55056 127 aa14.28□□□□□ -0.12
SGCE-207ENST00000447873 KIR2DL5BA0A0G2JN68 375 aa14.27□□□□□ -0.12
SGCE-207ENST00000447873 KIR2DL5BA0A0G2JPC4 375 aa14.27□□□□□ -0.12
SGCE-207ENST00000447873 GATCO43716 136 aaKnown RBP14.27□□□□□ -0.12
SGCE-207ENST00000447873 KIR2DL5AQ8N109 375 aa14.27□□□□□ -0.12
SGCE-207ENST00000447873 KIR2DL5BQ8NHK3 375 aa14.27□□□□□ -0.12
SGCE-207ENST00000447873 ANAPC16Q96DE5 110 aa14.27□□□□□ -0.12
SGCE-207ENST00000447873 RPS10P5Q9NQ39 176 aa14.27□□□□□ -0.12
SGCE-207ENST00000447873 NAGKQ9UJ70 344 aa14.27□□□□□ -0.12
SGCE-207ENST00000447873 PPP1R2P9O14990 202 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 C20orf144Q9BQM9 153 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 RPP21Q9H633 154 aaKnown RBP14.26□□□□□ -0.13
SGCE-207ENST00000447873 TMEM189A5PLL7 270 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 RBMY1A1P0DJD3 496 aaKnown RBP14.26□□□□□ -0.13
SGCE-207ENST00000447873 RBMY1CP0DJD4 496 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 RBMY1FQ15415 496 aaKnown RBP14.26□□□□□ -0.13
SGCE-207ENST00000447873 MUC21Q5SSG8 566 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 OR2D3Q8NGH3 330 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 TMEM208Q9BTX3 173 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 C11orf21Q9P2W6 132 aa14.26□□□□□ -0.13
SGCE-207ENST00000447873 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
SGCE-207ENST00000447873 LINC01559Q495D7 138 aa14.25□□□□□ -0.13
SGCE-207ENST00000447873 ATRAIDQ6UW56 229 aa14.25□□□□□ -0.13
SGCE-207ENST00000447873 FAM159AQ6UWV7 190 aa14.25□□□□□ -0.13
SGCE-207ENST00000447873 V9GYV3 84 aa14.25□□□□□ -0.13
SGCE-207ENST00000447873 TMSB15BA0A087X1C1 80 aa14.24□□□□□ -0.13
SGCE-207ENST00000447873 IGKV3D-20A0A0C4DH25 116 aa14.24□□□□□ -0.13
SGCE-207ENST00000447873 H7BYZ3 331 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms