RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 Q6ZTC4 211 aa8.83□□□□□ -1
SSR4-205ENST00000447375 ZFAND2AQ8N6M9 145 aa8.83□□□□□ -1
SSR4-205ENST00000447375 CMTM2Q8TAZ6 248 aa8.83□□□□□ -1
SSR4-205ENST00000447375 ZNF471Q9BX82 626 aaPredicted RBP8.83□□□□□ -1
SSR4-205ENST00000447375 YTHDF2Q9Y5A9 579 aaKnown RBP8.83□□□□□ -1
SSR4-205ENST00000447375 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
SSR4-205ENST00000447375 hCG_2014768A0A024R1R8 64 aa8.82□□□□□ -1
SSR4-205ENST00000447375 TRAV10A0A0B4J240 114 aa8.82□□□□□ -1
SSR4-205ENST00000447375 TEX48A0A1B0GUV7 120 aa8.82□□□□□ -1
SSR4-205ENST00000447375 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
SSR4-205ENST00000447375 C7orf71A4D174 169 aa8.82□□□□□ -1
SSR4-205ENST00000447375 UMAD1C9J7I0 102 aa8.82□□□□□ -1
SSR4-205ENST00000447375 J3KRW8 73 aa8.82□□□□□ -1
SSR4-205ENST00000447375 ZNF324O75467 553 aaPredicted RBP8.82□□□□□ -1
SSR4-205ENST00000447375 C1QBP02746 253 aa8.82□□□□□ -1
SSR4-205ENST00000447375 GPX1P07203 203 aa8.82□□□□□ -1
SSR4-205ENST00000447375 RNASE4P34096 147 aaKnown RBP8.82□□□□□ -1
SSR4-205ENST00000447375 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
SSR4-205ENST00000447375 CD300CQ08708 224 aa8.82□□□□□ -1
SSR4-205ENST00000447375 FAM222AQ5U5X8 452 aa8.82□□□□□ -1
SSR4-205ENST00000447375 TMED6Q8WW62 240 aa8.82□□□□□ -1
SSR4-205ENST00000447375 NIPSNAP3BQ9BS92 247 aa8.82□□□□□ -1
SSR4-205ENST00000447375 LENEPQ9Y5L5 61 aa8.82□□□□□ -1
SSR4-205ENST00000447375 IGLV2-18A0A075B6J9 118 aa8.81□□□□□ -1
SSR4-205ENST00000447375 A0A1W2PRE2 83 aa8.81□□□□□ -1
SSR4-205ENST00000447375 PFDN1O60925 122 aa8.81□□□□□ -1
SSR4-205ENST00000447375 HTN1P15515 57 aa8.81□□□□□ -1
SSR4-205ENST00000447375 Q6ZR54 194 aa8.81□□□□□ -1
SSR4-205ENST00000447375 ZNF767PQ75MW2 155 aa8.81□□□□□ -1
SSR4-205ENST00000447375 AKAP14Q86UN6 197 aa8.81□□□□□ -1
SSR4-205ENST00000447375 Q8TAT8 98 aa8.81□□□□□ -1
SSR4-205ENST00000447375 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
SSR4-205ENST00000447375 C16orf74Q96GX8 76 aa8.81□□□□□ -1
SSR4-205ENST00000447375 PYGO2Q9BRQ0 406 aa8.81□□□□□ -1
SSR4-205ENST00000447375 LINC00467Q9BRT7 94 aa8.81□□□□□ -1
SSR4-205ENST00000447375 SERTM2A0A1B0GWG4 89 aa8.8□□□□□ -1
SSR4-205ENST00000447375 LYRM9A8MSI8 78 aa8.8□□□□□ -1
SSR4-205ENST00000447375 GGTLC3B5MD39 225 aa8.8□□□□□ -1
SSR4-205ENST00000447375 TPT1P13693 172 aaKnown RBP8.8□□□□□ -1
SSR4-205ENST00000447375 FHITP49789 147 aa8.8□□□□□ -1
SSR4-205ENST00000447375 FGF8P55075 233 aaPredicted RBP8.8□□□□□ -1
SSR4-205ENST00000447375 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
SSR4-205ENST00000447375 BTN1A1Q13410 526 aa8.8□□□□□ -1
SSR4-205ENST00000447375 PRR9Q5T870 116 aa8.8□□□□□ -1
SSR4-205ENST00000447375 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
SSR4-205ENST00000447375 GOLT1AQ6ZVE7 132 aa8.8□□□□□ -1
SSR4-205ENST00000447375 CCDC28AQ8IWP9 274 aa8.8□□□□□ -1
SSR4-205ENST00000447375 C5orf17Q8NAS9 161 aa8.8□□□□□ -1
SSR4-205ENST00000447375 STOML3Q8TAV4 291 aa8.8□□□□□ -1
SSR4-205ENST00000447375 TMEM263Q8WUH6 116 aaKnown RBP8.8□□□□□ -1
SSR4-205ENST00000447375 TMPRSS5Q9H3S3 457 aa8.8□□□□□ -1
SSR4-205ENST00000447375 NACAE9PAV3 2078 aa8.79□□□□□ -1
SSR4-205ENST00000447375 MAP1LC3B2A6NCE7 125 aa8.79□□□□□ -1
SSR4-205ENST00000447375 TCRAP04437 139 aa8.79□□□□□ -1
SSR4-205ENST00000447375 GNG5P63218 68 aa8.79□□□□□ -1
SSR4-205ENST00000447375 IQCF2Q8IXL9 164 aa8.79□□□□□ -1
SSR4-205ENST00000447375 MBD3L1Q8WWY6 194 aa8.79□□□□□ -1
SSR4-205ENST00000447375 NKX6-2Q9C056 277 aaPredicted RBP8.79□□□□□ -1
SSR4-205ENST00000447375 MAP1LC3BQ9GZQ8 125 aa8.79□□□□□ -1
SSR4-205ENST00000447375 EPDR1Q9UM22 224 aa8.79□□□□□ -1
SSR4-205ENST00000447375 RPH3ALQ9UNE2 315 aa8.79□□□□□ -1
SSR4-205ENST00000447375 TIMM8BQ9Y5J9 83 aaPredicted RBP8.79□□□□□ -1
SSR4-205ENST00000447375 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
SSR4-205ENST00000447375 TRAV8-1A0A0A6YYK1 113 aa8.78□□□□□ -1
SSR4-205ENST00000447375 A0A1B0GVG6 124 aa8.78□□□□□ -1
SSR4-205ENST00000447375 INAFM2P0DMQ5 153 aa8.78□□□□□ -1
SSR4-205ENST00000447375 ANXA2RQ3ZCQ2 193 aa8.78□□□□□ -1
SSR4-205ENST00000447375 DPPA3Q6W0C5 159 aa8.78□□□□□ -1
SSR4-205ENST00000447375 Q6ZQT7 251 aa8.78□□□□□ -1
SSR4-205ENST00000447375 TVP23CQ96ET8 276 aa8.78□□□□□ -1
SSR4-205ENST00000447375 DMBT1Q9UGM3 2413 aaPredicted RBP8.78□□□□□ -1
SSR4-205ENST00000447375 FAM74A7A6NL05 159 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 K7EQM0 130 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 IGLV2-11P01706 119 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 DAD1P61803 113 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 Q6AWC8 147 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
SSR4-205ENST00000447375 EIF4E3Q8N5X7 224 aaKnown RBP8.77□□□□□ -1.01
SSR4-205ENST00000447375 FAM213BQ8TBF2 198 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 SFT2D1Q8WV19 159 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 NDUFAF3Q9BU61 184 aa8.77□□□□□ -1.01
SSR4-205ENST00000447375 NOP10Q9NPE3 64 aaKnown RBP8.77□□□□□ -1.01
SSR4-205ENST00000447375 IGHV1OR15-1A0A075B7D0 117 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 EPM2AB3EWF7 344 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 UBE2G2P60604 165 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 TNP2Q05952 138 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
SSR4-205ENST00000447375 SLC51BQ86UW2 128 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 CYB561D1Q8N8Q1 229 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 C11orf72Q8NBR9 251 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 ATG101Q9BSB4 218 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 TREM1Q9NP99 234 aa8.76□□□□□ -1.01
SSR4-205ENST00000447375 FBLL1A6NHQ2 334 aaKnown RBP8.75□□□□□ -1.01
SSR4-205ENST00000447375 CBY3A6NI87 242 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 RGS13O14921 159 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 IFNA7P01567 189 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 H2AFB1P0C5Y9 115 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 DEFB130BP0DP73 79 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 DEFB130AP0DP74 79 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms