RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 UBE2G2P60604 165 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 TMUB2Q71RG4 321 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 EIF4E3Q8N5X7 224 aaKnown RBP10.48□□□□□ -0.73
HDAC4-204ENST00000446876 C5orf17Q8NAS9 161 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 C11orf72Q8NBR9 251 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 TVP23CQ96ET8 276 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 NDUFAF3Q9BU61 184 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 GSN-AS1Q9NRJ2 163 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 TRBV7-9A0A0J9YWB2 115 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 MAP1LC3B2A6NCE7 125 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 F6UZH7 168 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 TCRAP04437 139 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 SUMO1P63165 101 aaKnown RBP10.47□□□□□ -0.73
HDAC4-204ENST00000446876 MUC21Q5SSG8 566 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 TMEM88Q6PEY1 159 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 MAP1LC3BQ9GZQ8 125 aa10.47□□□□□ -0.73
HDAC4-204ENST00000446876 IGHV1OR15-1A0A075B7D0 117 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 GAGE12BA1L429 117 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 F5H768 121 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 PFDN1O60925 122 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 GAGE7O76087 117 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 GAGE12FP0CL80 117 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 GAGE12GP0CL81 117 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 GAGE12IP0CL82 117 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 ANXA2RQ3ZCQ2 193 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 Q6ZTI0 123 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 TMED6Q8WW62 240 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 LENEPQ9Y5L5 61 aa10.46□□□□□ -0.73
HDAC4-204ENST00000446876 DNAH6Q9C0G6 4158 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 ATP5G1P05496 136 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 SEC11BP0C7V7 166 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 ATP5G3P48201 142 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 Q6AWC8 147 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 LINC00612Q8N6U2 182 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 ZNF680Q8NEM1 530 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 FAM213BQ8TBF2 198 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 C8orf49Q96NF6 230 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 TREM1Q9NP99 234 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 EPDR1Q9UM22 224 aa10.45□□□□□ -0.74
HDAC4-204ENST00000446876 A0A1B0GV50 99 aa10.44□□□□□ -0.74
HDAC4-204ENST00000446876 A0A1W2PRE2 83 aa10.44□□□□□ -0.74
HDAC4-204ENST00000446876 IGLV2-11P01706 119 aa10.44□□□□□ -0.74
HDAC4-204ENST00000446876 LGALSLQ3ZCW2 172 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-204ENST00000446876 NAGKQ9UJ70 344 aa10.44□□□□□ -0.74
HDAC4-204ENST00000446876 TRGV1A0A0A0MS02 117 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 SERTM2A0A1B0GWG4 89 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 FAM74A7A6NL05 159 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 TCL1AP56279 114 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 DAZ2Q13117 558 aaKnown RBP10.43□□□□□ -0.74
HDAC4-204ENST00000446876 PRNTQ86SH4 94 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 CYB561D1Q8N8Q1 229 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 FAM210BQ96KR6 192 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 LINC00479Q96M42 142 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 PSG8Q9UQ74 426 aa10.43□□□□□ -0.74
HDAC4-204ENST00000446876 TRAV34A0A0B4J273 112 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 K7EQM0 130 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 IFNA7P01567 189 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 C1QBP02746 253 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 TPT1P13693 172 aaKnown RBP10.42□□□□□ -0.74
HDAC4-204ENST00000446876 ZNF80P51504 273 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-204ENST00000446876 FLI1Q01543 452 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-204ENST00000446876 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 AKAP14Q86UN6 197 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 TMEM183AQ8IXX5 376 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 ATG101Q9BSB4 218 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
HDAC4-204ENST00000446876 MDFICQ9P1T7 246 aa10.42□□□□□ -0.74
HDAC4-204ENST00000446876 SPINK4O60575 86 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 HOXA5P20719 270 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 EIF5AP63241 154 aaKnown RBP10.41□□□□□ -0.74
HDAC4-204ENST00000446876 ZNF415Q09FC8 603 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 IBA57Q5T440 356 aaKnown RBP10.41□□□□□ -0.74
HDAC4-204ENST00000446876 FAM159AQ6UWV7 190 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 TMEM75Q8N9X5 138 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 STOML3Q8TAV4 291 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 SFT2D1Q8WV19 159 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 NDFIP1Q9BT67 221 aa10.41□□□□□ -0.74
HDAC4-204ENST00000446876 TRAV21A0A0B4J279 112 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 A0A1B0GVG6 124 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 UMAD1C9J7I0 102 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 PEX7O00628 323 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 P0DMU3 169 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 FAM231AP0DMU4 169 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 FAM231CP0DMU5 169 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 OR5I1Q13606 314 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 MBD3L1Q8WWY6 194 aa10.4□□□□□ -0.74
HDAC4-204ENST00000446876 NACAE9PAV3 2078 aa10.4□□□□□ -0.75
HDAC4-204ENST00000446876 TRGV2A0A075B6R0 118 aa10.39□□□□□ -0.75
HDAC4-204ENST00000446876 GNRH2O43555 120 aa10.39□□□□□ -0.75
HDAC4-204ENST00000446876 NUDT3O95989 172 aa10.39□□□□□ -0.75
HDAC4-204ENST00000446876 GCGP01275 180 aa10.39□□□□□ -0.75
HDAC4-204ENST00000446876 CST9LP1Q5W188 147 aa10.39□□□□□ -0.75
HDAC4-204ENST00000446876 C11orf21Q9P2W6 132 aa10.39□□□□□ -0.75
HDAC4-204ENST00000446876 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
HDAC4-204ENST00000446876 EPPK1P58107 5090 aaKnown RBP10.39□□□□□ -0.75
HDAC4-204ENST00000446876 MUC4Q99102 2169 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms