RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
CCDC188-202ENST00000444532 VPS13DQ5THJ4 4388 aa13.11□□□□□ -0.31
CCDC188-202ENST00000444532 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
CCDC188-202ENST00000444532 ZNF345Q14585 488 aa13.11□□□□□ -0.31
CCDC188-202ENST00000444532 IBA57Q5T440 356 aaKnown RBP13.11□□□□□ -0.31
CCDC188-202ENST00000444532 GOLT1AQ6ZVE7 132 aa13.11□□□□□ -0.31
CCDC188-202ENST00000444532 GSN-AS1Q9NRJ2 163 aa13.11□□□□□ -0.31
CCDC188-202ENST00000444532 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 SERTM2A0A1B0GWG4 89 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 GAGE12BA1L429 117 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 GAGE7O76087 117 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 GAGE12FP0CL80 117 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 GAGE12GP0CL81 117 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 GAGE12IP0CL82 117 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 AKR1C8PQ5T2L2 129 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 Q6AWC8 147 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 AKAP14Q86UN6 197 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 C5orf17Q8NAS9 161 aa13.1□□□□□ -0.31
CCDC188-202ENST00000444532 A0A0D9SG52 128 aa13.09□□□□□ -0.31
CCDC188-202ENST00000444532 TCL1AP56279 114 aa13.09□□□□□ -0.31
CCDC188-202ENST00000444532 RNF212Q495C1 297 aa13.09□□□□□ -0.31
CCDC188-202ENST00000444532 Q6ZQT7 251 aa13.09□□□□□ -0.31
CCDC188-202ENST00000444532 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
CCDC188-202ENST00000444532 ARPC5LQ9BPX5 153 aa13.09□□□□□ -0.31
CCDC188-202ENST00000444532 K7EQM0 130 aa13.08□□□□□ -0.32
CCDC188-202ENST00000444532 C1QBP02746 253 aa13.08□□□□□ -0.32
CCDC188-202ENST00000444532 SUMO1P63165 101 aaKnown RBP13.08□□□□□ -0.32
CCDC188-202ENST00000444532 GNG5P63218 68 aa13.08□□□□□ -0.32
CCDC188-202ENST00000444532 ZNF726P1Q15940 193 aa13.08□□□□□ -0.32
CCDC188-202ENST00000444532 Q6ZTI0 123 aa13.08□□□□□ -0.32
CCDC188-202ENST00000444532 UBE2DNLQ8IWF7 75 aa13.08□□□□□ -0.32
CCDC188-202ENST00000444532 TP53TG3Q9ULZ0 132 aa13.08□□□□□ -0.32
CCDC188-202ENST00000444532 KMT2AQ03164 3969 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 A0A1W2PRE2 83 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 TCRAP04437 139 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 LGALSLQ3ZCW2 172 aaPredicted RBP13.07□□□□□ -0.32
CCDC188-202ENST00000444532 TMUB2Q71RG4 321 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 IQCF2Q8IXL9 164 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 C18orf15Q96N68 181 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 KLF12Q9Y4X4 402 aa13.07□□□□□ -0.32
CCDC188-202ENST00000444532 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
CCDC188-202ENST00000444532 SPINK4O60575 86 aa13.06□□□□□ -0.32
CCDC188-202ENST00000444532 LGALS9BQ3B8N2 356 aa13.06□□□□□ -0.32
CCDC188-202ENST00000444532 FAM159AQ6UWV7 190 aa13.06□□□□□ -0.32
CCDC188-202ENST00000444532 TREM1Q9NP99 234 aa13.06□□□□□ -0.32
CCDC188-202ENST00000444532 TRGV2A0A075B6R0 118 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 TRGV1A0A0A0MS02 117 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 ZNF415Q09FC8 603 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 OR5I1Q13606 314 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 MUC21Q5SSG8 566 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
CCDC188-202ENST00000444532 TRAV21A0A0B4J279 112 aa13.04□□□□□ -0.32
CCDC188-202ENST00000444532 KANTRA0A1W2PQU2 76 aa13.04□□□□□ -0.32
CCDC188-202ENST00000444532 FBLL1A6NHQ2 334 aaKnown RBP13.04□□□□□ -0.32
CCDC188-202ENST00000444532 BCL2L11O43521 198 aa13.04□□□□□ -0.32
CCDC188-202ENST00000444532 NUDT3O95989 172 aa13.04□□□□□ -0.32
CCDC188-202ENST00000444532 FAM3BP58499 235 aaPredicted RBP13.04□□□□□ -0.32
CCDC188-202ENST00000444532 TDRG1Q3Y452 100 aa13.04□□□□□ -0.32
CCDC188-202ENST00000444532 NKX6-2Q9C056 277 aaPredicted RBP13.04□□□□□ -0.32
CCDC188-202ENST00000444532 TMPRSS5Q9H3S3 457 aa13.04□□□□□ -0.32
CCDC188-202ENST00000444532 TRGV11A0A075B6L2 103 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 H3BNG1 76 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 SEC11BP0C7V7 166 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 HOXA5P20719 270 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 CYB561D1Q8N8Q1 229 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 SGK494Q96LW2 274 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 ATG101Q9BSB4 218 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 ZNF471Q9BX82 626 aaPredicted RBP13.03□□□□□ -0.32
CCDC188-202ENST00000444532 PSG8Q9UQ74 426 aa13.03□□□□□ -0.32
CCDC188-202ENST00000444532 TRAV26-1A0A087WT03 109 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 MAP1LC3B2A6NCE7 125 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 FGF8P55075 233 aaPredicted RBP13.02□□□□□ -0.33
CCDC188-202ENST00000444532 TMEM183BQ1AE95 376 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 TMEM183AQ8IXX5 376 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 SPXQ9BT56 116 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 MAP1LC3BQ9GZQ8 125 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 MDFICQ9P1T7 246 aa13.02□□□□□ -0.33
CCDC188-202ENST00000444532 UMAD1C9J7I0 102 aa13.01□□□□□ -0.33
CCDC188-202ENST00000444532 F6UZH7 168 aa13.01□□□□□ -0.33
CCDC188-202ENST00000444532 PFDN1O60925 122 aa13.01□□□□□ -0.33
CCDC188-202ENST00000444532 IFNA7P01567 189 aa13.01□□□□□ -0.33
CCDC188-202ENST00000444532 IGLV2-11P01706 119 aa13.01□□□□□ -0.33
CCDC188-202ENST00000444532 EIF5AP63241 154 aaKnown RBP13.01□□□□□ -0.33
CCDC188-202ENST00000444532 FLI1Q01543 452 aaPredicted RBP13.01□□□□□ -0.33
CCDC188-202ENST00000444532 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
CCDC188-202ENST00000444532 NAGKQ9UJ70 344 aa13.01□□□□□ -0.33
CCDC188-202ENST00000444532 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
CCDC188-202ENST00000444532 FAM74A7A6NL05 159 aa13□□□□□ -0.33
CCDC188-202ENST00000444532 CCL18P55774 89 aa13□□□□□ -0.33
CCDC188-202ENST00000444532 UBE2G2P60604 165 aa13□□□□□ -0.33
CCDC188-202ENST00000444532 SAPCD1Q5SSQ6 148 aa13□□□□□ -0.33
CCDC188-202ENST00000444532 KCNS1Q96KK3 526 aa13□□□□□ -0.33
CCDC188-202ENST00000444532 MRPL16Q9NX20 251 aaKnown RBP13□□□□□ -0.33
CCDC188-202ENST00000444532 NACAE9PAV3 2078 aa13□□□□□ -0.33
CCDC188-202ENST00000444532 A0A0J9YY99 117 aa12.99□□□□□ -0.33
CCDC188-202ENST00000444532 PPT1P50897 306 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms