RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 LGALS9BQ3B8N2 356 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 RNF212Q495C1 297 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 AKR1C8PQ5T2L2 129 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 Q6ZTI0 123 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 C15orf53Q8NAA6 179 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 C11orf72Q8NBR9 251 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 Q8TAT8 98 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 HYLS1Q96M11 299 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 PYGO2Q9BRQ0 406 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 SH3BGRL3Q9H299 93 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 TMEM167BQ9NRX6 74 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 ZNF492Q9P255 531 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 TP53TG3Q9ULZ0 132 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 GAGE12BA1L429 117 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 DIRC3C9JPN6 131 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 G3V3Q6 166 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 HMGB3O15347 200 aaKnown RBP7.58□□□□□ -1.2
SF3A1-203ENST00000444440 GAGE7O76087 117 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 NUDT3O95989 172 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 GAGE12FP0CL80 117 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 GAGE12GP0CL81 117 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 GAGE12IP0CL82 117 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 CRISP2P16562 243 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 ZNF345Q14585 488 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 ARPC5LQ9BPX5 153 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 GSN-AS1Q9NRJ2 163 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 LENEPQ9Y5L5 61 aa7.58□□□□□ -1.2
SF3A1-203ENST00000444440 PRSS29PA6NIE9 313 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 SNURFLB1AK76 121 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 SMLR1H3BR10 107 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 K7EQM0 130 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 GCHFRP30047 84 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 EIF5AP63241 154 aaKnown RBP7.57□□□□□ -1.2
SF3A1-203ENST00000444440 LINC00336Q6ZUF6 198 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 KCNRGQ8N5I3 272 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 ZNRF2Q8NHG8 242 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 TMED6Q8WW62 240 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 TMPRSS5Q9H3S3 457 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 LINC00588Q9Y4M8 146 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 KLF12Q9Y4X4 402 aa7.57□□□□□ -1.2
SF3A1-203ENST00000444440 TRAV26-1A0A087WT03 109 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 A0A0J9YY99 117 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 CTXND1A0A1B0GTU2 59 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 SERTM2A0A1B0GWG4 89 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 KANTRA0A1W2PQU2 76 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 RGS13O14921 159 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 DAZ2Q13117 558 aaKnown RBP7.56□□□□□ -1.2
SF3A1-203ENST00000444440 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 SUN5Q8TC36 379 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 ST6GAL2Q96JF0 529 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 LINC00467Q9BRT7 94 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 CYTL1Q9NRR1 136 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 RPH3ALQ9UNE2 315 aa7.56□□□□□ -1.2
SF3A1-203ENST00000444440 OR5I1Q13606 314 aa7.55□□□□□ -1.2
SF3A1-203ENST00000444440 GOLT1AQ6ZVE7 132 aa7.55□□□□□ -1.2
SF3A1-203ENST00000444440 EIF4E3Q8N5X7 224 aaKnown RBP7.55□□□□□ -1.2
SF3A1-203ENST00000444440 C5orf17Q8NAS9 161 aa7.55□□□□□ -1.2
SF3A1-203ENST00000444440 ZNF680Q8NEM1 530 aa7.55□□□□□ -1.2
SF3A1-203ENST00000444440 STOML3Q8TAV4 291 aa7.55□□□□□ -1.2
SF3A1-203ENST00000444440 KRTAP17-1Q9BYP8 105 aa7.55□□□□□ -1.2
SF3A1-203ENST00000444440 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
SF3A1-203ENST00000444440 A0A1W2PRE2 83 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 UMAD1C9J7I0 102 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 PFDN1O60925 122 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 TCL1AP56279 114 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
SF3A1-203ENST00000444440 ANXA2RQ3ZCQ2 193 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 OR11H4Q8NGC9 324 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 VSIG2Q96IQ7 327 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 ATG101Q9BSB4 218 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 NDFIP1Q9BT67 221 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 ZNF471Q9BX82 626 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-203ENST00000444440 KRTAP1-5Q9BYS1 174 aa7.54□□□□□ -1.2
SF3A1-203ENST00000444440 IGHV1OR15-1A0A075B7D0 117 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 FBLL1A6NHQ2 334 aaKnown RBP7.53□□□□□ -1.2
SF3A1-203ENST00000444440 BCL2L11O43521 198 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 SPINK4O60575 86 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 SEC11BP0C7V7 166 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 MUC21Q5SSG8 566 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 Q6ZNX1 250 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 TMUB2Q71RG4 321 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 SSX7Q7RTT5 188 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 MRPL16Q9NX20 251 aaKnown RBP7.53□□□□□ -1.2
SF3A1-203ENST00000444440 EPDR1Q9UM22 224 aa7.53□□□□□ -1.2
SF3A1-203ENST00000444440 TRGV1A0A0A0MS02 117 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 NBDYA0A0U1RRE5 68 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 IFNA7P01567 189 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 TCRAP04437 139 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 FAM3BP58499 235 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-203ENST00000444440 GNG5P63218 68 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 ZNF726P1Q15940 193 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 ESRGQ1W209 222 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.21
SF3A1-203ENST00000444440 C1orf134Q5TEV5 83 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 Q6AWC8 147 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 FAM159AQ6UWV7 190 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms