RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 C20orf173Q96LM9 149 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 VGLL1Q99990 258 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 TRBV6-1A0A0K0K1D8 114 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 A0A1W2PPQ1 181 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 SNRPD3P62318 126 aaKnown RBP7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 ACTL10Q5JWF8 245 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 OR10G8Q8NGN5 311 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 Q8TAT8 98 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 ASCL2Q99929 193 aa7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 RNASE7Q9H1E1 156 aaKnown RBP7.16□□□□□ -1.26
SMPD4P1-203ENST00000443839 RBAKDNA6NC62 111 aa7.15□□□□□ -1.26
SMPD4P1-203ENST00000443839 PF4P02776 101 aa7.15□□□□□ -1.26
SMPD4P1-203ENST00000443839 IBA57Q5T440 356 aaKnown RBP7.15□□□□□ -1.26
SMPD4P1-203ENST00000443839 TMEM78Q5T7P6 136 aa7.15□□□□□ -1.26
SMPD4P1-203ENST00000443839 NDFIP1Q9BT67 221 aa7.15□□□□□ -1.26
SMPD4P1-203ENST00000443839 MLST8Q9BVC4 326 aa7.15□□□□□ -1.26
SMPD4P1-203ENST00000443839 FBN1P35555 2871 aaKnown RBP7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 XKRY2A2RUG3 117 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 GATCO43716 136 aaKnown RBP7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 AMBPP02760 352 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 ZNF688P0C7X2 276 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 ERCC8Q13216 396 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 SAPCD1Q5SSQ6 148 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 KCNIP4Q6PIL6 250 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 TMEM61Q8N0U2 210 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 OR10J6PQ8NGY7 276 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 IMMP2LQ96T52 175 aa7.15□□□□□ -1.27
SMPD4P1-203ENST00000443839 NOTCH3Q9UM47 2321 aa7.14□□□□□ -1.27
SMPD4P1-203ENST00000443839 K7EQG2 157 aa7.14□□□□□ -1.27
SMPD4P1-203ENST00000443839 CT45A10P0DMU9 189 aa7.14□□□□□ -1.27
SMPD4P1-203ENST00000443839 DEFB114Q30KQ6 69 aa7.14□□□□□ -1.27
SMPD4P1-203ENST00000443839 PSMG4Q5JS54 123 aa7.14□□□□□ -1.27
SMPD4P1-203ENST00000443839 ZC2HC1AQ96GY0 325 aa7.14□□□□□ -1.27
SMPD4P1-203ENST00000443839 OSTCQ9NRP0 149 aa7.14□□□□□ -1.27
SMPD4P1-203ENST00000443839 ZNF705GA8MUZ8 300 aaPredicted RBP7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 ZNF705DP0CH99 300 aaPredicted RBP7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 ZNF705BP0CI00 300 aaPredicted RBP7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 DEFB1P60022 68 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 HIST1H1AQ02539 215 aaPredicted RBP7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 JOSD1Q15040 202 aaPredicted RBP7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 CD300EQ496F6 205 aaPredicted RBP7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 C9orf47Q6ZRZ4 202 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 DAZAP1Q96EP5 407 aaKnown RBP7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 C8orf49Q96NF6 230 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 PRR25Q96S07 402 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 STAB1Q9NY15 2570 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 HSBP1L1C9JCN9 74 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 F6UB75 175 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 SAP30O75446 220 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 ZNF138P52744 262 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 KRTAP24-1Q3LI83 254 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 BTF3L4Q96K17 158 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 CITED1Q99966 193 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 SIGLEC8Q9NYZ4 499 aa7.13□□□□□ -1.27
SMPD4P1-203ENST00000443839 COL6A5A8TX70 2615 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 P01737 135 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 PKIAP61925 76 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 NUDT10Q8NFP7 164 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 OR8A1Q8NGG7 326 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 NUDT11Q96G61 164 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 ZNF492Q9P255 531 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 V9GYV3 84 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 NPIPB6E9PJ23 425 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 GZMBP10144 247 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 DEFA6Q01524 100 aa7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 SPAG8Q99932 426 aaPredicted RBP7.12□□□□□ -1.27
SMPD4P1-203ENST00000443839 TRAV2A0A0B4J234 112 aa7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 TRAV25A0A0B4J276 109 aa7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 OR4C46A6NHA9 309 aa7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 CA1P00915 261 aaPredicted RBP7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 FAM162BQ5T6X4 162 aa7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 LINC00482Q8N8I6 264 aa7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 LINC00477Q96M19 166 aa7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 IL36BQ9NZH7 164 aa7.11□□□□□ -1.27
SMPD4P1-203ENST00000443839 C19orf71A6NCJ1 209 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 IZUMO1RA6ND01 250 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 TSTD3H0UI37 97 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 EBLN2Q6P2I7 272 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 COX8CQ7Z4L0 72 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 PRIMA1Q86XR5 153 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 C14orf144Q96I85 54 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 CD33P20138 364 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 DDTP30046 118 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 CRIP1P50238 77 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 TCL1AP56279 114 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 GDF5OSQ5U4N7 250 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 LENEPQ9Y5L5 61 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 TRAPPC1Q9Y5R8 145 aa7.1□□□□□ -1.27
SMPD4P1-203ENST00000443839 AGRNO00468 2067 aa7.09□□□□□ -1.27
SMPD4P1-203ENST00000443839 SH2D1AO60880 128 aa7.09□□□□□ -1.27
SMPD4P1-203ENST00000443839 DEFB131AP59861 70 aa7.09□□□□□ -1.27
SMPD4P1-203ENST00000443839 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
SMPD4P1-203ENST00000443839 TMEM18Q96B42 140 aa7.09□□□□□ -1.27
SMPD4P1-203ENST00000443839 SPXQ9BT56 116 aa7.09□□□□□ -1.27
SMPD4P1-203ENST00000443839 TRAV9-1A0A075B6T8 112 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms