RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 RXFP4Q8TDU9 374 aa6.89□□□□□ -1.31
SYN3-204ENST00000441821 C20orf173Q96LM9 149 aa6.89□□□□□ -1.31
SYN3-204ENST00000441821 FUT9Q9Y231 359 aa6.89□□□□□ -1.31
SYN3-204ENST00000441821 MRPS16Q9Y3D3 137 aaKnown RBP6.89□□□□□ -1.31
SYN3-204ENST00000441821 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 LINC00862A6NCI5 91 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 M0R2Z0 102 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 OR7C2O60412 319 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 DUSP14O95147 198 aaKnown RBP6.88□□□□□ -1.31
SYN3-204ENST00000441821 MEOX2P50222 304 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 ERVFC1-1P60608 527 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 ZNF90Q03938 601 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 SPINK13Q1W4C9 94 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 LCN15Q6UWW0 184 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 COMMD7Q86VX2 200 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 RAB24Q969Q5 203 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 GPR82Q96P67 336 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 TXNDC17Q9BRA2 123 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 NKX6-2Q9C056 277 aaPredicted RBP6.88□□□□□ -1.31
SYN3-204ENST00000441821 EIF5A2Q9GZV4 153 aaKnown RBP6.88□□□□□ -1.31
SYN3-204ENST00000441821 SLC25A22Q9H936 323 aa6.88□□□□□ -1.31
SYN3-204ENST00000441821 TIMM8BQ9Y5J9 83 aaPredicted RBP6.88□□□□□ -1.31
SYN3-204ENST00000441821 H3BNG1 76 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 RPL7P18124 248 aaKnown RBP6.87□□□□□ -1.31
SYN3-204ENST00000441821 S100A1P23297 94 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 CNN1P51911 297 aaKnown RBP6.87□□□□□ -1.31
SYN3-204ENST00000441821 OR5I1Q13606 314 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 Q6ZSN1 163 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 LINC00305Q7Z4B0 112 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 OR8I2Q8N0Y5 310 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 TMEM256Q8N2U0 113 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 OR10J6PQ8NGY7 276 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 C16orf74Q96GX8 76 aa6.87□□□□□ -1.31
SYN3-204ENST00000441821 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
SYN3-204ENST00000441821 IGKV1OR2-108A0A075B7D4 117 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 A0A0J9YY99 117 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 F6UZH7 168 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 STAG3L2P0CL84 134 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 STAG3L3P0CL85 134 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 GALR1P47211 349 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 TAS2R60P59551 318 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 UBE2L3P68036 154 aaKnown RBP6.86□□□□□ -1.31
SYN3-204ENST00000441821 ZNF493Q6ZR52 646 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 LINC01587Q99440 93 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 TREM1Q9NP99 234 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 GNG13Q9P2W3 67 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 ARL2-SNX15V9GYD0 113 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
SYN3-204ENST00000441821 IGKV1D-37A0A075B6S9 117 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 RBFOX3A6NFN3 312 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 GUK1Q16774 197 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 TCEAL7Q9BRU2 100 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 SLC25A39Q9BZJ4 359 aaPredicted RBP6.85□□□□□ -1.31
SYN3-204ENST00000441821 OR51M1Q9H341 326 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
SYN3-204ENST00000441821 VAX2Q9UIW0 290 aa6.85□□□□□ -1.31
SYN3-204ENST00000441821 A0A087WTM6 91 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 A0A1B0GV50 99 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
SYN3-204ENST00000441821 KRBOX1C9JBD0 128 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 PDE6DO43924 150 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
SYN3-204ENST00000441821 ARL14EPLP0DKL9 152 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 BCL2P10415 239 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 HTN1P15515 57 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 HOXA5P20719 270 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 GCSHP23434 173 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 GATA2P23769 480 aaPredicted RBP6.84□□□□□ -1.31
SYN3-204ENST00000441821 GCHFRP30047 84 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 FHITP49789 147 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 EIF4E3Q8N5X7 224 aaKnown RBP6.84□□□□□ -1.31
SYN3-204ENST00000441821 LYPD6BQ8NI32 183 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
SYN3-204ENST00000441821 RPUSD4Q96CM3 377 aaKnown RBP6.84□□□□□ -1.31
SYN3-204ENST00000441821 FAM210AQ96ND0 272 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 SHANK2-AS3Q9BTD1 123 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 AAMDCQ9H7C9 122 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
SYN3-204ENST00000441821 H3BRN7 92 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 K7EQM0 130 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 SIVA1O15304 175 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 HIST1H1EP10412 219 aaKnown RBP6.83□□□□□ -1.32
SYN3-204ENST00000441821 FGF8P55075 233 aaPredicted RBP6.83□□□□□ -1.32
SYN3-204ENST00000441821 CST9LP1Q5W188 147 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 MIR17HGQ75NE6 70 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 NFE4Q86UQ8 179 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 CMTM2Q8TAZ6 248 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 TMEM263Q8WUH6 116 aaKnown RBP6.83□□□□□ -1.32
SYN3-204ENST00000441821 PCNPQ8WW12 178 aaKnown RBP6.83□□□□□ -1.32
SYN3-204ENST00000441821 TMEM37Q8WXS4 190 aa6.83□□□□□ -1.32
SYN3-204ENST00000441821 TRAV8-2A0A0B4J237 113 aa6.82□□□□□ -1.32
SYN3-204ENST00000441821 ZNF98A6NK75 572 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms