RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 FAM213BQ8TBF2 198 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 MAP1LC3BQ9GZQ8 125 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 TMEM167BQ9NRX6 74 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
ITGB1-207ENST00000439974 KLLNB2CW77 178 aa11.38□□□□□ -0.59
ITGB1-207ENST00000439974 GPX1P07203 203 aa11.38□□□□□ -0.59
ITGB1-207ENST00000439974 TAS2R60P59551 318 aa11.38□□□□□ -0.59
ITGB1-207ENST00000439974 SUMO1P63165 101 aaKnown RBP11.38□□□□□ -0.59
ITGB1-207ENST00000439974 FAM74A1Q5RGS3 127 aa11.38□□□□□ -0.59
ITGB1-207ENST00000439974 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
ITGB1-207ENST00000439974 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
ITGB1-207ENST00000439974 H7BYZ3 331 aa11.37□□□□□ -0.59
ITGB1-207ENST00000439974 SEC11BP0C7V7 166 aa11.37□□□□□ -0.59
ITGB1-207ENST00000439974 TPT1P13693 172 aaKnown RBP11.37□□□□□ -0.59
ITGB1-207ENST00000439974 UBE2DNLQ8IWF7 75 aa11.37□□□□□ -0.59
ITGB1-207ENST00000439974 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
ITGB1-207ENST00000439974 KRTAP17-1Q9BYP8 105 aa11.37□□□□□ -0.59
ITGB1-207ENST00000439974 RBAKDNA6NC62 111 aa11.36□□□□□ -0.59
ITGB1-207ENST00000439974 HTN3P15516 51 aa11.36□□□□□ -0.59
ITGB1-207ENST00000439974 CRISP2P16562 243 aa11.36□□□□□ -0.59
ITGB1-207ENST00000439974 NKX2-5P52952 324 aaPredicted RBP11.36□□□□□ -0.59
ITGB1-207ENST00000439974 F6UZH7 168 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 M0R2N4 97 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 ZNF324O75467 553 aaPredicted RBP11.35□□□□□ -0.59
ITGB1-207ENST00000439974 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 LGALS9BQ3B8N2 356 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 C9orf62Q8N4C0 152 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 STOML3Q8TAV4 291 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 SFT2D1Q8WV19 159 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 TVP23CQ96ET8 276 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 TP53TG3Q9ULZ0 132 aa11.35□□□□□ -0.59
ITGB1-207ENST00000439974 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 TCRAP04437 139 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 DAD1P61803 113 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 EIF5AP63241 154 aaKnown RBP11.34□□□□□ -0.59
ITGB1-207ENST00000439974 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 MUC21Q5SSG8 566 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 C5orf17Q8NAS9 161 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
ITGB1-207ENST00000439974 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 C20orf144Q9BQM9 153 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 NOP10Q9NPE3 64 aaKnown RBP11.34□□□□□ -0.59
ITGB1-207ENST00000439974 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
ITGB1-207ENST00000439974 RYR1P21817 5038 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 TRAV34A0A0B4J273 112 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 A0A1W2PRE2 83 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 FAM74A7A6NL05 159 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 RTL8CO15255 209 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 IFNA7P01567 189 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 CCDC28AQ8IWP9 274 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 C16orf74Q96GX8 76 aa11.33□□□□□ -0.6
ITGB1-207ENST00000439974 CBY3A6NI87 242 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 UMAD1C9J7I0 102 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 RGS13O14921 159 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 RNF212Q495C1 297 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 TMEM88Q6PEY1 159 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
ITGB1-207ENST00000439974 C8orf49Q96NF6 230 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 PYGO2Q9BRQ0 406 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 GSN-AS1Q9NRJ2 163 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 PKD1P98161 4303 aa11.32□□□□□ -0.6
ITGB1-207ENST00000439974 IGLV2-18A0A075B6J9 118 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 LYRM9A8MSI8 78 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 PAGE4O60829 102 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 IGLV2-11P01706 119 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 NMBP08949 121 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 ATP5G3P48201 142 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 CST9LP1Q5W188 147 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 TREM1Q9NP99 234 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 NAGKQ9UJ70 344 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 TIMM8BQ9Y5J9 83 aaPredicted RBP11.31□□□□□ -0.6
ITGB1-207ENST00000439974 NACAE9PAV3 2078 aa11.31□□□□□ -0.6
ITGB1-207ENST00000439974 IGHV1OR15-1A0A075B7D0 117 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 H2AFB1P0C5Y9 115 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 CCL20P78556 96 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 Q6ZR54 194 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 CYB561D1Q8N8Q1 229 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 ATG101Q9BSB4 218 aa11.3□□□□□ -0.6
ITGB1-207ENST00000439974 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
ITGB1-207ENST00000439974 PEX7O00628 323 aa11.29□□□□□ -0.6
ITGB1-207ENST00000439974 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-207ENST00000439974 FLI1Q01543 452 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-207ENST00000439974 DPPA3Q6W0C5 159 aa11.29□□□□□ -0.6
ITGB1-207ENST00000439974 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
ITGB1-207ENST00000439974 EIF4E3Q8N5X7 224 aaKnown RBP11.29□□□□□ -0.6
ITGB1-207ENST00000439974 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
ITGB1-207ENST00000439974 C11orf72Q8NBR9 251 aa11.29□□□□□ -0.6
ITGB1-207ENST00000439974 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
ITGB1-207ENST00000439974 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 K7EQM0 130 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms