RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TMEM88Q6PEY1 159 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 TMUB2Q71RG4 321 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 ARL6IP6Q8N6S5 226 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 TMED6Q8WW62 240 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 NACAE9PAV3 2078 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 MUC4Q99102 2169 aa9.33□□□□□ -0.92
LINC00399-201ENST00000439008 DNAH6Q9C0G6 4158 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 hCG_2014768A0A024R1R8 64 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 IGHV1OR15-1A0A075B7D0 117 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 A0A0D9SG52 128 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 CBY3A6NI87 242 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 F6UZH7 168 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 GAGE7O76087 117 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 UBE2G2P60604 165 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 MUC21Q5SSG8 566 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 Q6AWC8 147 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 CCDC28AQ8IWP9 274 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 IQCF2Q8IXL9 164 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 TCTE3Q8IZS6 198 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 EIF4E3Q8N5X7 224 aaKnown RBP9.32□□□□□ -0.92
LINC00399-201ENST00000439008 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 CMTM2Q8TAZ6 248 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 LINC00479Q96M42 142 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 C8orf49Q96NF6 230 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 ZNF471Q9BX82 626 aaPredicted RBP9.32□□□□□ -0.92
LINC00399-201ENST00000439008 TMEM167BQ9NRX6 74 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 LENEPQ9Y5L5 61 aa9.32□□□□□ -0.92
LINC00399-201ENST00000439008 FRAS1Q86XX4 4008 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 A0A1B0GVG6 124 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 MAP1LC3B2A6NCE7 125 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 HOXA5P20719 270 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 ZNF80P51504 273 aaPredicted RBP9.31□□□□□ -0.92
LINC00399-201ENST00000439008 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
LINC00399-201ENST00000439008 FAM74A1Q5RGS3 127 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 NDUFAF3Q9BU61 184 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 MAP1LC3BQ9GZQ8 125 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 C11orf21Q9P2W6 132 aa9.31□□□□□ -0.92
LINC00399-201ENST00000439008 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 FAM74A7A6NL05 159 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 RGS13O14921 159 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 SEC11BP0C7V7 166 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 TCL1AP56279 114 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 DNAH10Q8IVF4 4471 aa9.3□□□□□ -0.92
LINC00399-201ENST00000439008 EPPK1P58107 5090 aaKnown RBP9.29□□□□□ -0.92
LINC00399-201ENST00000439008 KANTRA0A1W2PQU2 76 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 SNURFLB1AK76 121 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 F5H768 121 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 ATP5G1P05496 136 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 ATP5G3P48201 142 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 TREM1Q9NP99 234 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 PSG8Q9UQ74 426 aa9.29□□□□□ -0.92
LINC00399-201ENST00000439008 GNRH2O43555 120 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 SPINK4O60575 86 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 C1QBP02746 253 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 FLI1Q01543 452 aaPredicted RBP9.28□□□□□ -0.92
LINC00399-201ENST00000439008 IBA57Q5T440 356 aaKnown RBP9.28□□□□□ -0.92
LINC00399-201ENST00000439008 CYB561D1Q8N8Q1 229 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 ZNF680Q8NEM1 530 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 FAM213BQ8TBF2 198 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 MBD3L1Q8WWY6 194 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 ATG101Q9BSB4 218 aa9.28□□□□□ -0.92
LINC00399-201ENST00000439008 MRPL16Q9NX20 251 aaKnown RBP9.28□□□□□ -0.92
LINC00399-201ENST00000439008 TRGV1A0A0A0MS02 117 aa9.27□□□□□ -0.93
LINC00399-201ENST00000439008 A0A1B0GV50 99 aa9.27□□□□□ -0.93
LINC00399-201ENST00000439008 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
LINC00399-201ENST00000439008 TDRG1Q3Y452 100 aa9.27□□□□□ -0.93
LINC00399-201ENST00000439008 PRNTQ86SH4 94 aa9.27□□□□□ -0.93
LINC00399-201ENST00000439008 TMEM183AQ8IXX5 376 aa9.27□□□□□ -0.93
LINC00399-201ENST00000439008 STOML3Q8TAV4 291 aa9.27□□□□□ -0.93
LINC00399-201ENST00000439008 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 PEX7O00628 323 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 PFDN1O60925 122 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 CCL20P78556 96 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 POM121L12Q8N7R1 296 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 SFT2D1Q8WV19 159 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 NAGKQ9UJ70 344 aa9.26□□□□□ -0.93
LINC00399-201ENST00000439008 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 UMAD1C9J7I0 102 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 PAGE4O60829 102 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 GCGP01275 180 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 IFNA7P01567 189 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 TYMSP04818 313 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 TPT1P13693 172 aaKnown RBP9.25□□□□□ -0.93
LINC00399-201ENST00000439008 OR5I1Q13606 314 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 VSIG2Q96IQ7 327 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 C18orf15Q96N68 181 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 ARL2-SNX15V9GYD0 113 aa9.25□□□□□ -0.93
LINC00399-201ENST00000439008 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
LINC00399-201ENST00000439008 A0A0J9YY99 117 aa9.24□□□□□ -0.93
LINC00399-201ENST00000439008 IGHV3-53P01767 116 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms