RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 U3KQ87 197 aa6.4□□□□□ -1.38
RTN4-211ENST00000438462 OR5G3P0C626 314 aa6.39□□□□□ -1.39
RTN4-211ENST00000438462 RPS10P46783 165 aaKnown RBP6.39□□□□□ -1.39
RTN4-211ENST00000438462 XP32Q5T750 250 aa6.39□□□□□ -1.39
RTN4-211ENST00000438462 NAA50Q9GZZ1 169 aaKnown RBP6.39□□□□□ -1.39
RTN4-211ENST00000438462 A0A087WWL8 130 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 RGS10O43665 173 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 HYPMO75409 117 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 NMBP08949 121 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 CALB2P22676 271 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 ZNF876PQ49A33 203 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 LPCAT3Q6P1A2 487 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 LINC00337Q8N6G1 96 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 CCDC197Q8NCU1 140 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 MGLLQ99685 303 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 RPP21Q9H633 154 aaKnown RBP6.38□□□□□ -1.39
RTN4-211ENST00000438462 IFT46Q9NQC8 304 aa6.38□□□□□ -1.39
RTN4-211ENST00000438462 TRAV18A0A075B6X5 111 aa6.37□□□□□ -1.39
RTN4-211ENST00000438462 M0R3E3 92 aa6.37□□□□□ -1.39
RTN4-211ENST00000438462 PDCD5O14737 125 aa6.37□□□□□ -1.39
RTN4-211ENST00000438462 CIDEAO60543 219 aa6.37□□□□□ -1.39
RTN4-211ENST00000438462 AHSA2Q719I0 299 aa6.37□□□□□ -1.39
RTN4-211ENST00000438462 ZNF546Q86UE3 836 aa6.37□□□□□ -1.39
RTN4-211ENST00000438462 FAM24AA6NFZ4 105 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 A6NJY4 79 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 FABP5Q01469 135 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 SP6Q3SY56 376 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 FAM159AQ6UWV7 190 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 UFD1Q92890 307 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 PRR34Q9NV39 138 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 NAGKQ9UJ70 344 aa6.36□□□□□ -1.39
RTN4-211ENST00000438462 SMIM30A4D0T7 59 aa6.35□□□□□ -1.39
RTN4-211ENST00000438462 LINC00869P0C866 280 aa6.35□□□□□ -1.39
RTN4-211ENST00000438462 SS18Q15532 418 aa6.35□□□□□ -1.39
RTN4-211ENST00000438462 DTD1Q8TEA8 209 aa6.35□□□□□ -1.39
RTN4-211ENST00000438462 YIPF6Q96EC8 236 aa6.35□□□□□ -1.39
RTN4-211ENST00000438462 MND1Q9BWT6 205 aa6.35□□□□□ -1.39
RTN4-211ENST00000438462 C3orf85A0A1B0GTC6 90 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 H3BQ15 152 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 CTDSPLO15194 276 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 IGLC2P0DOY2 106 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 AMTP48728 403 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 TAS2R46P59540 309 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 SURF2Q15527 256 aaPredicted RBP6.34□□□□□ -1.39
RTN4-211ENST00000438462 C15orf56Q8N910 161 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 CYGBQ8WWM9 190 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 PLCXD1Q9NUJ7 323 aa6.34□□□□□ -1.39
RTN4-211ENST00000438462 IGKV2-40A0A087WW87 121 aaPredicted RBP6.33□□□□□ -1.4
RTN4-211ENST00000438462 GNRH2O43555 120 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 IGKV2D-40P01614 121 aaPredicted RBP6.33□□□□□ -1.4
RTN4-211ENST00000438462 IL5P05113 134 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 CFC1P0CG37 223 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 PGAM2P15259 253 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 RAB3BP20337 219 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 RND3P61587 244 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 EIF5AP63241 154 aaKnown RBP6.33□□□□□ -1.4
RTN4-211ENST00000438462 AKR1C1Q04828 323 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 TMEM78Q5T7P6 136 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 PATE2Q6UY27 113 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 CYP2G1PQ6ZSU1 146 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 BPIFA4PQ86YQ2 179 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 LINC00269Q8N2A0 174 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 OR2T35Q8NGX2 323 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 RHBDL2Q9NX52 303 aa6.33□□□□□ -1.4
RTN4-211ENST00000438462 LSM2Q9Y333 95 aaKnown RBP6.33□□□□□ -1.4
RTN4-211ENST00000438462 FGF8P55075 233 aaPredicted RBP6.32□□□□□ -1.4
RTN4-211ENST00000438462 PIGPP57054 158 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 PLP1P60201 277 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 SPHARQ15513 63 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 TRAM1Q15629 374 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 C14orf178Q8N769 122 aaPredicted RBP6.32□□□□□ -1.4
RTN4-211ENST00000438462 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 ARL6Q9H0F7 186 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 ARV1Q9H2C2 271 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 RBKSQ9H477 322 aa6.32□□□□□ -1.4
RTN4-211ENST00000438462 A0A087X002 238 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 UCP3P55916 312 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 PHF5AQ7RTV0 110 aaKnown RBP6.31□□□□□ -1.4
RTN4-211ENST00000438462 S100A7AQ86SG5 101 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 OR10G7Q8NGN6 311 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 SLC39A9Q9NUM3 307 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 ZNF492Q9P255 531 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 PAIP2BQ9ULR5 123 aaKnown RBP6.31□□□□□ -1.4
RTN4-211ENST00000438462 RNF24Q9Y225 148 aa6.31□□□□□ -1.4
RTN4-211ENST00000438462 TRAV1-2A0A0B4J238 106 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 TYMSP04818 313 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 ZNF266Q14584 549 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 LINC00305Q7Z4B0 112 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 OR13C8Q8NGS7 320 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 ATP5SQ99766 215 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 ANAPC10Q9UM13 185 aa6.3□□□□□ -1.4
RTN4-211ENST00000438462 EIF3GO75821 320 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTN4-211ENST00000438462 MYL9P24844 172 aa6.29□□□□□ -1.4
RTN4-211ENST00000438462 RAB5CP51148 216 aa6.29□□□□□ -1.4
RTN4-211ENST00000438462 ATP5IP56385 69 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms