RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 UBE2G2P60604 165 aa11.67□□□□□ -0.54
CTSD-205ENST00000438213 EIF4E3Q8N5X7 224 aaKnown RBP11.67□□□□□ -0.54
CTSD-205ENST00000438213 SFT2D1Q8WV19 159 aa11.67□□□□□ -0.54
CTSD-205ENST00000438213 MBD3L1Q8WWY6 194 aa11.67□□□□□ -0.54
CTSD-205ENST00000438213 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
CTSD-205ENST00000438213 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
CTSD-205ENST00000438213 PLAC8L1A1L4L8 177 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 CBY3A6NI87 242 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 GGTLC3B5MD39 225 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 RAB5CP51148 216 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 ANXA2RQ3ZCQ2 193 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 SLC51BQ86UW2 128 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 CYB561D1Q8N8Q1 229 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 ZNF680Q8NEM1 530 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 TREM1Q9NP99 234 aa11.66□□□□□ -0.54
CTSD-205ENST00000438213 NOP10Q9NPE3 64 aaKnown RBP11.66□□□□□ -0.54
CTSD-205ENST00000438213 IGHV1OR15-1A0A075B7D0 117 aa11.65□□□□□ -0.54
CTSD-205ENST00000438213 TRAV8-1A0A0A6YYK1 113 aa11.65□□□□□ -0.54
CTSD-205ENST00000438213 FAM74A7A6NL05 159 aa11.65□□□□□ -0.54
CTSD-205ENST00000438213 H2AFB1P0C5Y9 115 aa11.65□□□□□ -0.54
CTSD-205ENST00000438213 ZFP69Q49AA0 526 aa11.65□□□□□ -0.54
CTSD-205ENST00000438213 PRR9Q5T870 116 aa11.65□□□□□ -0.54
CTSD-205ENST00000438213 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
CTSD-205ENST00000438213 F6UZH7 168 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 PPT1P50897 306 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 CST9LP1Q5W188 147 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 Q6AWC8 147 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 HIST1H2BAQ96A08 127 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 FAM210BQ96KR6 192 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
CTSD-205ENST00000438213 A0A1B0GVG6 124 aa11.63□□□□□ -0.55
CTSD-205ENST00000438213 HTN3P15516 51 aa11.63□□□□□ -0.55
CTSD-205ENST00000438213 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
CTSD-205ENST00000438213 DAZ2Q13117 558 aaKnown RBP11.63□□□□□ -0.55
CTSD-205ENST00000438213 SAPCD1Q5SSQ6 148 aa11.63□□□□□ -0.55
CTSD-205ENST00000438213 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
CTSD-205ENST00000438213 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
CTSD-205ENST00000438213 STARD9Q9P2P6 4700 aa11.63□□□□□ -0.55
CTSD-205ENST00000438213 IGHV4-4A0A075B6R2 117 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 TRAV21A0A0B4J279 112 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 TEX46H3BTG2 121 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 IBA57Q5T440 356 aaKnown RBP11.62□□□□□ -0.55
CTSD-205ENST00000438213 FAM159AQ6UWV7 190 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 PRNTQ86SH4 94 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 TVP23CQ96ET8 276 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 NDUFAF3Q9BU61 184 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 GSN-AS1Q9NRJ2 163 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 APLNQ9ULZ1 77 aa11.62□□□□□ -0.55
CTSD-205ENST00000438213 PEX7O00628 323 aa11.61□□□□□ -0.55
CTSD-205ENST00000438213 LY6G6CO95867 125 aa11.61□□□□□ -0.55
CTSD-205ENST00000438213 ATP5G1P05496 136 aa11.61□□□□□ -0.55
CTSD-205ENST00000438213 ATP5G3P48201 142 aa11.61□□□□□ -0.55
CTSD-205ENST00000438213 SULT1A2P50226 295 aa11.61□□□□□ -0.55
CTSD-205ENST00000438213 Q6ZQT7 251 aa11.61□□□□□ -0.55
CTSD-205ENST00000438213 C9orf62Q8N4C0 152 aa11.61□□□□□ -0.55
CTSD-205ENST00000438213 A0A1B0GV50 99 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 PAGE4O60829 102 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 IGLV2-11P01706 119 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 SMUG1Q53HV7 270 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 MUC21Q5SSG8 566 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 LGALS9CQ6DKI2 356 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 C11orf72Q8NBR9 251 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 LINC00476Q8WZB0 136 aa11.6□□□□□ -0.55
CTSD-205ENST00000438213 TRGV11A0A075B6L2 103 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 TRAV1-1A0A0B4J248 108 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 TRAV34A0A0B4J273 112 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 GAGE12BA1L429 117 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 GAGE7O76087 117 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 GAGE12FP0CL80 117 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 GAGE12GP0CL81 117 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 GAGE12IP0CL82 117 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 TCL1AP56279 114 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 KCNS1Q96KK3 526 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 LINC00479Q96M42 142 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 TP53TG3Q9ULZ0 132 aa11.59□□□□□ -0.55
CTSD-205ENST00000438213 KMT2CQ8NEZ4 4911 aaKnown RBP11.58□□□□□ -0.56
CTSD-205ENST00000438213 F5H768 121 aa11.58□□□□□ -0.56
CTSD-205ENST00000438213 ZNF415Q09FC8 603 aa11.58□□□□□ -0.56
CTSD-205ENST00000438213 TDRG1Q3Y452 100 aa11.58□□□□□ -0.56
CTSD-205ENST00000438213 LINC00612Q8N6U2 182 aa11.58□□□□□ -0.56
CTSD-205ENST00000438213 C8orf49Q96NF6 230 aa11.58□□□□□ -0.56
CTSD-205ENST00000438213 NAGKQ9UJ70 344 aa11.58□□□□□ -0.56
CTSD-205ENST00000438213 KLF12Q9Y4X4 402 aa11.58□□□□□ -0.56
CTSD-205ENST00000438213 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 GCGP01275 180 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 UBE2G1P62253 170 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 TMEM183BQ1AE95 376 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 LGALS9BQ3B8N2 356 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 TMEM183AQ8IXX5 376 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 FMC1Q96HJ9 113 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 SPXQ9BT56 116 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 SDF2L1Q9HCN8 221 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 ZFP30Q9Y2G7 519 aa11.57□□□□□ -0.56
CTSD-205ENST00000438213 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
CTSD-205ENST00000438213 SPINK4O60575 86 aa11.56□□□□□ -0.56
CTSD-205ENST00000438213 S100A9P06702 114 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms