RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 MUC21Q5SSG8 566 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 OR2T35Q8NGX2 323 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 GNPNAT1Q96EK6 184 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-207ENST00000436324 ARPC5LQ9BPX5 153 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-207ENST00000436324 SH3BGRL3Q9H299 93 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 RNF222A6NCQ9 220 aa12.79□□□□□ -0.36
HMGN1-207ENST00000436324 GNG5P63218 68 aa12.79□□□□□ -0.36
HMGN1-207ENST00000436324 RPL7L1Q6DKI1 246 aaKnown RBP12.79□□□□□ -0.36
HMGN1-207ENST00000436324 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
HMGN1-207ENST00000436324 OR2G3Q8NGZ4 309 aa12.79□□□□□ -0.36
HMGN1-207ENST00000436324 ASB13Q8WXK3 278 aa12.79□□□□□ -0.36
HMGN1-207ENST00000436324 RAB24Q969Q5 203 aa12.79□□□□□ -0.36
HMGN1-207ENST00000436324 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
HMGN1-207ENST00000436324 TCL1AP56279 114 aa12.78□□□□□ -0.36
HMGN1-207ENST00000436324 TNFSF18Q9UNG2 199 aa12.78□□□□□ -0.36
HMGN1-207ENST00000436324 RTL8CO15255 209 aa12.77□□□□□ -0.37
HMGN1-207ENST00000436324 STAG3L2P0CL84 134 aa12.77□□□□□ -0.37
HMGN1-207ENST00000436324 STAG3L3P0CL85 134 aa12.77□□□□□ -0.37
HMGN1-207ENST00000436324 CCL18P55774 89 aa12.77□□□□□ -0.37
HMGN1-207ENST00000436324 Q6ZR54 194 aa12.77□□□□□ -0.37
HMGN1-207ENST00000436324 MRPL16Q9NX20 251 aaKnown RBP12.77□□□□□ -0.37
HMGN1-207ENST00000436324 FRAS1Q86XX4 4008 aa12.77□□□□□ -0.37
HMGN1-207ENST00000436324 TRAV8-1A0A0A6YYK1 113 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 BORCS7-ASMTA0A0B4J1R7 106 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 SPINK4O60575 86 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 IGHV3-53P01767 116 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 MBP02144 154 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 GCHFRP30047 84 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 SERF2P84101 59 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
HMGN1-207ENST00000436324 LINC00336Q6ZUF6 198 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 NAGKQ9UJ70 344 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 LINC00588Q9Y4M8 146 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 LENEPQ9Y5L5 61 aa12.76□□□□□ -0.37
HMGN1-207ENST00000436324 FAM3BP58499 235 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-207ENST00000436324 ZNF415Q09FC8 603 aa12.75□□□□□ -0.37
HMGN1-207ENST00000436324 IQCF2Q8IXL9 164 aa12.75□□□□□ -0.37
HMGN1-207ENST00000436324 ACTR3CQ9C0K3 210 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-207ENST00000436324 PRSS29PA6NIE9 313 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 F6UZH7 168 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 SMLR1H3BR10 107 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 TMEM183BQ1AE95 376 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 Q6AWC8 147 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 FAM159AQ6UWV7 190 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 SSX7Q7RTT5 188 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 TMEM183AQ8IXX5 376 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 ZNRF2Q8NHG8 242 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 TMED6Q8WW62 240 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 ST6GAL2Q96JF0 529 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 MDFICQ9P1T7 246 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
HMGN1-207ENST00000436324 G3V3Q6 166 aa12.73□□□□□ -0.37
HMGN1-207ENST00000436324 TVP23CQ96ET8 276 aa12.73□□□□□ -0.37
HMGN1-207ENST00000436324 TREM1Q9NP99 234 aa12.73□□□□□ -0.37
HMGN1-207ENST00000436324 ARPC5O15511 151 aa12.72□□□□□ -0.37
HMGN1-207ENST00000436324 CXorf1O96002 111 aa12.72□□□□□ -0.37
HMGN1-207ENST00000436324 SUMO1P63165 101 aaKnown RBP12.72□□□□□ -0.37
HMGN1-207ENST00000436324 C1orf134Q5TEV5 83 aa12.72□□□□□ -0.37
HMGN1-207ENST00000436324 ARL6IP6Q8N6S5 226 aa12.72□□□□□ -0.37
HMGN1-207ENST00000436324 VSIG2Q96IQ7 327 aa12.72□□□□□ -0.37
HMGN1-207ENST00000436324 C18orf15Q96N68 181 aa12.72□□□□□ -0.37
HMGN1-207ENST00000436324 C5orf17Q8NAS9 161 aa12.71□□□□□ -0.37
HMGN1-207ENST00000436324 SUN5Q8TC36 379 aa12.71□□□□□ -0.37
HMGN1-207ENST00000436324 TMEM167BQ9NRX6 74 aa12.71□□□□□ -0.37
HMGN1-207ENST00000436324 TRGV11A0A075B6L2 103 aa12.7□□□□□ -0.38
HMGN1-207ENST00000436324 GNRH2O43555 120 aa12.7□□□□□ -0.38
HMGN1-207ENST00000436324 TCRAP04437 139 aa12.7□□□□□ -0.38
HMGN1-207ENST00000436324 ZNF726P1Q15940 193 aa12.7□□□□□ -0.38
HMGN1-207ENST00000436324 ESRGQ1W209 222 aa12.7□□□□□ -0.38
HMGN1-207ENST00000436324 TRAV21A0A0B4J279 112 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 NBDYA0A0U1RRE5 68 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 H3BNG1 76 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 PAX4O43316 350 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 AKR1C8PQ5T2L2 129 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 C8orf49Q96NF6 230 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
HMGN1-207ENST00000436324 A0A096LPF7 62 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 CTXND1A0A1B0GTU2 59 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 A0A1B0GVY2 172 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 K7EQM0 130 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-207ENST00000436324 PRNTQ86SH4 94 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 SPXQ9BT56 116 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 Q9H8V8 135 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 CYTL1Q9NRR1 136 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 PSG8Q9UQ74 426 aa12.68□□□□□ -0.38
HMGN1-207ENST00000436324 SERTM2A0A1B0GWG4 89 aa12.67□□□□□ -0.38
HMGN1-207ENST00000436324 TAAR5O14804 337 aa12.67□□□□□ -0.38
HMGN1-207ENST00000436324 SFTA3P0C7M3 94 aa12.67□□□□□ -0.38
HMGN1-207ENST00000436324 UBE2G2P60604 165 aa12.67□□□□□ -0.38
HMGN1-207ENST00000436324 FHL2Q14192 279 aa12.67□□□□□ -0.38
HMGN1-207ENST00000436324 TRGV4A0A0C4DH28 118 aa12.66□□□□□ -0.38
HMGN1-207ENST00000436324 IGHV3-16A0A0C4DH30 117 aa12.66□□□□□ -0.38
HMGN1-207ENST00000436324 TYMSP04818 313 aa12.66□□□□□ -0.38
HMGN1-207ENST00000436324 ZNF80P51504 273 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms