RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
SMPD4-207ENST00000435455 OR11H4Q8NGC9 324 aa11.49□□□□□ -0.57
SMPD4-207ENST00000435455 K7EQM0 130 aa11.48□□□□□ -0.57
SMPD4-207ENST00000435455 ZNF726P1Q15940 193 aa11.48□□□□□ -0.57
SMPD4-207ENST00000435455 TMEM88Q6PEY1 159 aa11.48□□□□□ -0.57
SMPD4-207ENST00000435455 LINC00612Q8N6U2 182 aa11.48□□□□□ -0.57
SMPD4-207ENST00000435455 C15orf53Q8NAA6 179 aa11.48□□□□□ -0.57
SMPD4-207ENST00000435455 VPS13DQ5THJ4 4388 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 KANTRA0A1W2PQU2 76 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 F5H768 121 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 SUMO1P63165 101 aaKnown RBP11.47□□□□□ -0.57
SMPD4-207ENST00000435455 GNG5P63218 68 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 IBA57Q5T440 356 aaKnown RBP11.47□□□□□ -0.57
SMPD4-207ENST00000435455 Q6AWC8 147 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 GSN-AS1Q9NRJ2 163 aa11.47□□□□□ -0.57
SMPD4-207ENST00000435455 GAGE12BA1L429 117 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 GGTLC3B5MD39 225 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 BCL2L11O43521 198 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 GAGE7O76087 117 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 GAGE12FP0CL80 117 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 GAGE12GP0CL81 117 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 GAGE12IP0CL82 117 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 EIF5AP63241 154 aaKnown RBP11.46□□□□□ -0.57
SMPD4-207ENST00000435455 C11orf72Q8NBR9 251 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 NDFIP1Q9BT67 221 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 ZNF471Q9BX82 626 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-207ENST00000435455 EPDR1Q9UM22 224 aa11.46□□□□□ -0.57
SMPD4-207ENST00000435455 TRAV8-1A0A0A6YYK1 113 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 MAP1LC3B2A6NCE7 125 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 TCRAP04437 139 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 SEC11BP0C7V7 166 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 TCL1AP56279 114 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 Q6ZQT7 251 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 NKX6-2Q9C056 277 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-207ENST00000435455 MAP1LC3BQ9GZQ8 125 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 TREM1Q9NP99 234 aa11.45□□□□□ -0.58
SMPD4-207ENST00000435455 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
SMPD4-207ENST00000435455 ZNF415Q09FC8 603 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 FAM159AQ6UWV7 190 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 Q6ZNX1 250 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 Q6ZTI0 123 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 POM121L12Q8N7R1 296 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 CYB561D1Q8N8Q1 229 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 STOML3Q8TAV4 291 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 TMPRSS5Q9H3S3 457 aa11.44□□□□□ -0.58
SMPD4-207ENST00000435455 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 TRAV21A0A0B4J279 112 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 UMAD1C9J7I0 102 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 PFDN1O60925 122 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 IFNA7P01567 189 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 FGF8P55075 233 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-207ENST00000435455 MUC21Q5SSG8 566 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 TMUB2Q71RG4 321 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 ATG101Q9BSB4 218 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 TP53TG3Q9ULZ0 132 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 KLF12Q9Y4X4 402 aa11.43□□□□□ -0.58
SMPD4-207ENST00000435455 TRGV2A0A075B6R0 118 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 SPINK4O60575 86 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 UBE2G2P60604 165 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 FLI1Q01543 452 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-207ENST00000435455 RNF212Q495C1 297 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 TCTE3Q8IZS6 198 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 TMEM75Q8N9X5 138 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 C18orf15Q96N68 181 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 MUC4Q99102 2169 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 DNAH6Q9C0G6 4158 aa11.42□□□□□ -0.58
SMPD4-207ENST00000435455 TRGV11A0A075B6L2 103 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 FAM74A7A6NL05 159 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 F6UZH7 168 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 PPT1P50897 306 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 TMEM183BQ1AE95 376 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 LGALS9BQ3B8N2 356 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 TDRG1Q3Y452 100 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 TMEM183AQ8IXX5 376 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
SMPD4-207ENST00000435455 TPT1P13693 172 aaKnown RBP11.4□□□□□ -0.58
SMPD4-207ENST00000435455 OR5I1Q13606 314 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 ZFP69Q49AA0 526 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 FAM213BQ8TBF2 198 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 KCNS1Q96KK3 526 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 SPXQ9BT56 116 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 NAGKQ9UJ70 344 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.58
SMPD4-207ENST00000435455 PEX7O00628 323 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 NUDT3O95989 172 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 IGLV2-11P01706 119 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 FHITP49789 147 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 SMUG1Q53HV7 270 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 SAPCD1Q5SSQ6 148 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 MBD3L1Q8WWY6 194 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 HIST1H2BAQ96A08 127 aa11.39□□□□□ -0.59
SMPD4-207ENST00000435455 MRPL16Q9NX20 251 aaKnown RBP11.39□□□□□ -0.59
SMPD4-207ENST00000435455 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms