RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 RPH3ALQ9UNE2 315 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 GAGE12BA1L429 117 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 GAGE7O76087 117 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 GAGE12FP0CL80 117 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 GAGE12GP0CL81 117 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 GAGE12IP0CL82 117 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 TCL1AP56279 114 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 RNF212Q495C1 297 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 Q6AWC8 147 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 UBE2DNLQ8IWF7 75 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 C5orf17Q8NAS9 161 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 C18orf15Q96N68 181 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 ARPC5LQ9BPX5 153 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 KMT2AQ03164 3969 aa6.9□□□□□ -1.3
HDAC6-207ENST00000430858 TRGV2A0A075B6R0 118 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 SMLR1H3BR10 107 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 GNG5P63218 68 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 ZNF345Q14585 488 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 Q6ZQT7 251 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 Q6ZTI0 123 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 CYTL1Q9NRR1 136 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 TP53TG3Q9ULZ0 132 aa6.89□□□□□ -1.31
HDAC6-207ENST00000430858 TRGV1A0A0A0MS02 117 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 CTXND1A0A1B0GTU2 59 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 HMSDA8MTL9 139 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 K7EQM0 130 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 SPINK4O60575 86 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 NUDT3O95989 172 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 TCRAP04437 139 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 FAM3BP58499 235 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-207ENST00000430858 SUMO1P63165 101 aaKnown RBP6.88□□□□□ -1.31
HDAC6-207ENST00000430858 ZNF415Q09FC8 603 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 OR5I1Q13606 314 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 ZNF726P1Q15940 193 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 LGALS9BQ3B8N2 356 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 FAM159AQ6UWV7 190 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 IQCF2Q8IXL9 164 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 KCNRGQ8N5I3 272 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 NDFIP1Q9BT67 221 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 TREM1Q9NP99 234 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 KLF12Q9Y4X4 402 aa6.88□□□□□ -1.31
HDAC6-207ENST00000430858 TRGV11A0A075B6L2 103 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 TRAV26-1A0A087WT03 109 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 TRAV8-1A0A0A6YYK1 113 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 TRAV21A0A0B4J279 112 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 A0A1W2PRE2 83 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 GGTLC3B5MD39 225 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 H3BNG1 76 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 HOXA5P20719 270 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 MUC21Q5SSG8 566 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 SSX7Q7RTT5 188 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 TVP23CQ96ET8 276 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 ATG101Q9BSB4 218 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 TMPRSS5Q9H3S3 457 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 EPDR1Q9UM22 224 aa6.87□□□□□ -1.31
HDAC6-207ENST00000430858 A0A0D9SG52 128 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 FBLL1A6NHQ2 334 aaKnown RBP6.86□□□□□ -1.31
HDAC6-207ENST00000430858 F6UZH7 168 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 CCL18P55774 89 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 TDRG1Q3Y452 100 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 CYB561D1Q8N8Q1 229 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 TMEM75Q8N9X5 138 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 OR11H4Q8NGC9 324 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 NKX6-2Q9C056 277 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-207ENST00000430858 NAGKQ9UJ70 344 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 PSG8Q9UQ74 426 aa6.86□□□□□ -1.31
HDAC6-207ENST00000430858 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 A0A0J9YY99 117 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 KANTRA0A1W2PQU2 76 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 SEC11BP0C7V7 166 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 EIF5AP63241 154 aaKnown RBP6.85□□□□□ -1.31
HDAC6-207ENST00000430858 FLI1Q01543 452 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-207ENST00000430858 TMEM183BQ1AE95 376 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 TMEM183AQ8IXX5 376 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 STOML3Q8TAV4 291 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 KCNS1Q96KK3 526 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 SPXQ9BT56 116 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 MRPL16Q9NX20 251 aaKnown RBP6.85□□□□□ -1.31
HDAC6-207ENST00000430858 MDFICQ9P1T7 246 aa6.85□□□□□ -1.31
HDAC6-207ENST00000430858 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
HDAC6-207ENST00000430858 IGLV2-18A0A075B6J9 118 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 MAP1LC3B2A6NCE7 125 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 FAM74A7A6NL05 159 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 UMAD1C9J7I0 102 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 M0R2N4 97 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 BCL2L11O43521 198 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 IFNA7P01567 189 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 IGLV2-11P01706 119 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 FGF8P55075 233 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-207ENST00000430858 UBE2G2P60604 165 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 SLAQ13239 276 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 ZFP69Q49AA0 526 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 SAPCD1Q5SSQ6 148 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 PRNTQ86SH4 94 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 RASL10AQ92737 203 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 HIST1H2BAQ96A08 127 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms