RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 SAA1P0DJI8 122 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 HOXA4Q00056 320 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 C3orf36Q3SXR2 165 aa11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 MORN3Q6PF18 240 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 MRPL35Q9NZE8 188 aaKnown RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 TMEM158Q8WZ71 300 aa11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 SPTAN1Q13813 2472 aaKnown RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 DUSP14O95147 198 aaKnown RBP11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 IGHV3-48P01763 117 aa11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 MRAPQ8TCY5 172 aa11.44□□□□□ -0.58
SYNGAP1-203ENST00000428982 IGLV1-44P01699 117 aa11.43□□□□□ -0.58
SYNGAP1-203ENST00000428982 Q6ZQT7 251 aa11.43□□□□□ -0.58
SYNGAP1-203ENST00000428982 TCRAP04437 139 aa11.43□□□□□ -0.58
SYNGAP1-203ENST00000428982 TCL1BO95988 128 aa11.43□□□□□ -0.58
SYNGAP1-203ENST00000428982 CADP27708 2225 aa11.43□□□□□ -0.58
SYNGAP1-203ENST00000428982 CARD19Q96LW7 228 aa11.43□□□□□ -0.58
SYNGAP1-203ENST00000428982 LYZP61626 148 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 WDFY3Q8IZQ1 3526 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 CEP295Q9C0D2 2601 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 OOSP1A8MZH6 123 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 ORM1P02763 201 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 GNLYP22749 145 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 Q8N7P7 452 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 UQCRQO14949 82 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 ZNF415Q09FC8 603 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 CR1LQ2VPA4 569 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
SYNGAP1-203ENST00000428982 C17orf100A8MU93 164 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 C3orf22Q8N5N4 141 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 TMEM167AQ8TBQ9 72 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 HCFC1P51610 2035 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 MRPL20Q9BYC9 149 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 PKDREJQ9NTG1 2253 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 GATA4P43694 442 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 TMEM219Q86XT9 240 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 WISP2O76076 250 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 IGLC6P0CF74 106 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 LOXL3P58215 753 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 ZNF503Q96F45 646 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
SYNGAP1-203ENST00000428982 POLEQ07864 2286 aa11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 TMEM213A2RRL7 107 aa11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 CRLF1O75462 422 aa11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 LGALS1P09382 135 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 Q8N1Y9 231 aa11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 Q8NA96 180 aa11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 TRGV9Q99603 122 aa11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 COX6B1P14854 86 aa11.4□□□□□ -0.58
SYNGAP1-203ENST00000428982 SPTBN4Q9H254 2564 aa11.4□□□□□ -0.59
SYNGAP1-203ENST00000428982 MRPL51Q4U2R6 128 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-203ENST00000428982 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
SYNGAP1-203ENST00000428982 FAM216BQ8N7L0 139 aa11.39□□□□□ -0.59
SYNGAP1-203ENST00000428982 H7C1H1 209 aa11.39□□□□□ -0.59
SYNGAP1-203ENST00000428982 BRWD1-AS2P59051 145 aa11.39□□□□□ -0.59
SYNGAP1-203ENST00000428982 NUP37Q8NFH4 326 aa11.39□□□□□ -0.59
SYNGAP1-203ENST00000428982 SCGB3A1Q96QR1 104 aa11.39□□□□□ -0.59
SYNGAP1-203ENST00000428982 TRGV11A0A075B6L2 103 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 FHL3Q13643 280 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 C17orf58Q2M2W7 97 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 OTORQ9NRC9 128 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 PLCE1Q9P212 2302 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 MLANAQ16655 118 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 Q86TA4 180 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 AGRNO00468 2067 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 HLA-DMBP28068 263 aa11.38□□□□□ -0.59
SYNGAP1-203ENST00000428982 COL8A2P25067 703 aa11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 HRCT1Q6UXD1 115 aa11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 SMCPP49901 116 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 SEM1Q6ZVN7 128 aa11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 PKIGQ9Y2B9 76 aa11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 TNFRSF13BO14836 293 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-203ENST00000428982 FAM201AQ5SY85 155 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 MAPKAPK5-AS1Q8N8E1 139 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 PIEZO2Q9H5I5 2752 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 ABCA4P78363 2273 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 ZNF134P52741 427 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 DUX3Q96PT4 197 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 PRSS46E5RG02 174 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 NDUFA4L2Q9NRX3 87 aa11.36□□□□□ -0.59
SYNGAP1-203ENST00000428982 LINC00527Q9UJ94 153 aa11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 M0R2P5 195 aa11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 WIPF1O43516 503 aa11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 LAGE3Q14657 143 aa11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 ZNF833PQ6ZTB9 187 aa11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 MDFICQ9P1T7 246 aa11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 TLN1Q9Y490 2541 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-203ENST00000428982 PRSS2P07478 247 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 SLC25A16P16260 332 aa11.34□□□□□ -0.59
SYNGAP1-203ENST00000428982 HCP5Q6MZN7 132 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms