RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 KIR2DL4Q99706 377 aa12.7□□□□□ -0.38
RHBDF1-204ENST00000428730 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
RHBDF1-204ENST00000428730 PRSS29PA6NIE9 313 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 COX8CQ7Z4L0 72 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 ZGRF1Q86YA3 2104 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 Q6ZQT7 251 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 NRACQ8N912 160 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 ARRDC1-AS1Q9H2J1 176 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 SMAD5-AS1Q9Y6J3 95 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 POLEQ07864 2286 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 PLEKHB2Q96CS7 222 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 C11orf21Q9P2W6 132 aa12.69□□□□□ -0.38
RHBDF1-204ENST00000428730 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 PLNP26678 52 aa12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 ADIPOQQ15848 244 aa12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 IL17RELQ6ZVW7 336 aa12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 SRSF8Q9BRL6 282 aaKnown RBP12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 ATP6V0E2Q8NHE4 81 aa12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 FAM215AQ9Y5M1 114 aa12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
RHBDF1-204ENST00000428730 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
RHBDF1-204ENST00000428730 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
RHBDF1-204ENST00000428730 TMEM78Q5T7P6 136 aa12.67□□□□□ -0.38
RHBDF1-204ENST00000428730 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
RHBDF1-204ENST00000428730 BUB1B-PAK6H3BSN5 160 aa12.67□□□□□ -0.38
RHBDF1-204ENST00000428730 IGLV1-47P01700 117 aa12.67□□□□□ -0.38
RHBDF1-204ENST00000428730 F8VRH5 84 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 F8W735 103 aaPredicted RBP12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 TNFRSF13BO14836 293 aaPredicted RBP12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 ANAPC13Q9BS18 74 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 PCNX1Q96RV3 2341 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 FAM90A27PA6NNH2 459 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 SPRY2O43597 315 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 VKORC1Q9BQB6 163 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 MGAQ8IWI9 3026 aa12.66□□□□□ -0.38
RHBDF1-204ENST00000428730 H7C1H1 209 aa12.65□□□□□ -0.38
RHBDF1-204ENST00000428730 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
RHBDF1-204ENST00000428730 PRADC1Q9BSG0 188 aa12.65□□□□□ -0.38
RHBDF1-204ENST00000428730 RAXQ9Y2V3 346 aa12.65□□□□□ -0.38
RHBDF1-204ENST00000428730 ATMQ13315 3056 aa12.65□□□□□ -0.38
RHBDF1-204ENST00000428730 TRAV17A0A0B4J275 112 aa12.65□□□□□ -0.38
RHBDF1-204ENST00000428730 H3BVH4 76 aa12.65□□□□□ -0.38
RHBDF1-204ENST00000428730 ZNF815PA8K554 130 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 ANXA2RQ3ZCQ2 193 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 KLHL30-AS1Q8NEE0 82 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 SCGB1D4Q6XE38 83 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 PPDPFLQ8WWR9 84 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 TMEM190Q8WZ59 177 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 CNOT1A5YKK6 2376 aaKnown RBP12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 TIMM23O14925 209 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 TCL1BO95988 128 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 RPL7P18124 248 aaKnown RBP12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 SRSF9Q13242 221 aaKnown RBP eCLIP12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 FANCD2OSQ96PS1 177 aa12.64□□□□□ -0.39
RHBDF1-204ENST00000428730 B5MCH6 92 aa12.63□□□□□ -0.39
RHBDF1-204ENST00000428730 TEN1Q86WV5 123 aa12.63□□□□□ -0.39
RHBDF1-204ENST00000428730 CD59P13987 128 aa12.63□□□□□ -0.39
RHBDF1-204ENST00000428730 SLC25A16P16260 332 aa12.63□□□□□ -0.39
RHBDF1-204ENST00000428730 UBE2D1P51668 147 aa12.63□□□□□ -0.39
RHBDF1-204ENST00000428730 SCGB3A1Q96QR1 104 aa12.63□□□□□ -0.39
RHBDF1-204ENST00000428730 IGHV3-66A0A0C4DH42 116 aa12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 ONECUT1Q9UBC0 465 aa12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 RALYQ9UKM9 306 aaKnown RBP12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 UBE2D3P61077 147 aa12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 UBE2D2P62837 147 aa12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 C1orf210Q8IVY1 113 aa12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 ANKRD29Q8N6D5 301 aa12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 DEFB104AQ8WTQ1 72 aa12.62□□□□□ -0.39
RHBDF1-204ENST00000428730 LINC01619G3V211 115 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 MFAP4P55083 255 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 Q6ZS92 163 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 RAB1BQ9H0U4 201 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 IGHV3OR16-13A0A075B7E8 117 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 IGHV3-74A0A0B4J1X5 117 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 LYNX1G3V0Z9 82 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 LYNX1P0DP58 116 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 EMP1P54849 157 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 C3orf36Q3SXR2 165 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 NUP37Q8NFH4 326 aa12.61□□□□□ -0.39
RHBDF1-204ENST00000428730 CACNA1BQ00975 2339 aa12.6□□□□□ -0.39
RHBDF1-204ENST00000428730 BSPH1Q075Z2 132 aa12.6□□□□□ -0.39
RHBDF1-204ENST00000428730 RASL10AQ92737 203 aa12.6□□□□□ -0.39
RHBDF1-204ENST00000428730 CD7P09564 240 aa12.6□□□□□ -0.39
RHBDF1-204ENST00000428730 SRSF2Q01130 221 aaKnown RBP12.6□□□□□ -0.39
RHBDF1-204ENST00000428730 NEXN-AS1Q8NBZ9 246 aa12.6□□□□□ -0.39
RHBDF1-204ENST00000428730 TRAV12-1A0A0B4J245 112 aa12.59□□□□□ -0.39
RHBDF1-204ENST00000428730 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
RHBDF1-204ENST00000428730 C21orf62Q9NYP8 219 aa12.59□□□□□ -0.39
RHBDF1-204ENST00000428730 ZNF688P0C7X2 276 aa12.59□□□□□ -0.39
RHBDF1-204ENST00000428730 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
RHBDF1-204ENST00000428730 NDPQ00604 133 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms