RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 ZNF80P51504 273 aaPredicted RBP9.18□□□□□ -0.94
TRIM39-207ENST00000428404 KIR3DS1Q14943 382 aa9.18□□□□□ -0.94
TRIM39-207ENST00000428404 SMUG1Q53HV7 270 aa9.18□□□□□ -0.94
TRIM39-207ENST00000428404 PRR9Q5T870 116 aa9.18□□□□□ -0.94
TRIM39-207ENST00000428404 LINC00322Q6ZN03 302 aaPredicted RBP9.18□□□□□ -0.94
TRIM39-207ENST00000428404 ISOC2Q96AB3 205 aa9.18□□□□□ -0.94
TRIM39-207ENST00000428404 C19orf71A6NCJ1 209 aa9.17□□□□□ -0.94
TRIM39-207ENST00000428404 GIG44P09565 113 aaPredicted RBP9.17□□□□□ -0.94
TRIM39-207ENST00000428404 MGST1P10620 155 aaKnown RBP9.17□□□□□ -0.94
TRIM39-207ENST00000428404 S100A1P23297 94 aa9.17□□□□□ -0.94
TRIM39-207ENST00000428404 CDKN1BP46527 198 aa9.17□□□□□ -0.94
TRIM39-207ENST00000428404 OR5I1Q13606 314 aa9.17□□□□□ -0.94
TRIM39-207ENST00000428404 SVBPQ8N300 66 aa9.17□□□□□ -0.94
TRIM39-207ENST00000428404 SRD5A3Q9H8P0 318 aa9.17□□□□□ -0.94
TRIM39-207ENST00000428404 BIN3Q9NQY0 253 aa9.17□□□□□ -0.94
TRIM39-207ENST00000428404 A8MZ25 164 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 M0R2Z0 102 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 CRXO43186 299 aaPredicted RBP9.16□□□□□ -0.94
TRIM39-207ENST00000428404 ZNF324O75467 553 aaPredicted RBP9.16□□□□□ -0.94
TRIM39-207ENST00000428404 GPX1P07203 203 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 ADIRFQ15847 76 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 SPINK13Q1W4C9 94 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 FAM162BQ5T6X4 162 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 Q6AWC8 147 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 CLRN3Q8NCR9 226 aa9.16□□□□□ -0.94
TRIM39-207ENST00000428404 FABP5P3A8MUU1 101 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 B4DEV8 164 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 SH2D1AO60880 128 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 AMBPP02760 352 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
TRIM39-207ENST00000428404 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.94
TRIM39-207ENST00000428404 NUTF2P61970 127 aaKnown RBP9.15□□□□□ -0.94
TRIM39-207ENST00000428404 BTN1A1Q13410 526 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 MORN3Q6PF18 240 aaPredicted RBP9.15□□□□□ -0.94
TRIM39-207ENST00000428404 Q6ZQT7 251 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 SFRP2Q96HF1 295 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
TRIM39-207ENST00000428404 TRAV12-2A0A075B6T6 113 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 C7orf71A4D174 169 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 M0R036 132 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 SNAPINO95295 136 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 PFN1P07737 140 aaKnown RBP9.14□□□□□ -0.95
TRIM39-207ENST00000428404 IGHV4-30-4P0DP06 118 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 FXYD7P58549 80 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 PRR27Q6MZM9 219 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 ZNF575Q86XF7 245 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
TRIM39-207ENST00000428404 C11orf21Q9P2W6 132 aa9.14□□□□□ -0.95
TRIM39-207ENST00000428404 LOC102724200A0A096LPH7 203 aaPredicted RBP9.13□□□□□ -0.95
TRIM39-207ENST00000428404 TRAV21A0A0B4J279 112 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 KIR2DL5BA0A0G2JN68 375 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 KIR2DL5BA0A0G2JPC4 375 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 C7orf77A4D0Y5 90 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 J3KRW8 73 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 RBMY1A1P0DJD3 496 aaKnown RBP9.13□□□□□ -0.95
TRIM39-207ENST00000428404 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
TRIM39-207ENST00000428404 RNF212Q495C1 297 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 ATRAIDQ6UW56 229 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 KIR2DL5AQ8N109 375 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 CSNK1G2-AS1Q8NCQ2 148 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 CSTL1Q9H114 145 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 TUBA4BQ9H853 241 aa9.13□□□□□ -0.95
TRIM39-207ENST00000428404 NBEAL2Q6ZNJ1 2754 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 A0A087WWC5 75 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 TRAV12-3A0A0B4J271 114 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 MT-ND4LP03901 98 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 RHEBQ15382 184 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
TRIM39-207ENST00000428404 OR10G8Q8NGN5 311 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 DAZAP1Q96EP5 407 aaKnown RBP9.12□□□□□ -0.95
TRIM39-207ENST00000428404 C20orf144Q9BQM9 153 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 XCL2Q9UBD3 114 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 V9GYV3 84 aa9.12□□□□□ -0.95
TRIM39-207ENST00000428404 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 PPP1R2P9O14990 202 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 P01737 135 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 CT83Q5H943 113 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 C1orf158Q8N1D5 194 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 ANAPC16Q96DE5 110 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 LINC00467Q9BRT7 94 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 C1QTNF4Q9BXJ3 329 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 TMEM242Q9NWH2 141 aa9.11□□□□□ -0.95
TRIM39-207ENST00000428404 K7EIL1 84 aa9.1□□□□□ -0.95
TRIM39-207ENST00000428404 GATCO43716 136 aaKnown RBP9.1□□□□□ -0.95
TRIM39-207ENST00000428404 CA1P00915 261 aaPredicted RBP9.1□□□□□ -0.95
TRIM39-207ENST00000428404 INSP01308 110 aa9.1□□□□□ -0.95
TRIM39-207ENST00000428404 RPP21Q9H633 154 aaKnown RBP9.1□□□□□ -0.95
TRIM39-207ENST00000428404 RPS10P5Q9NQ39 176 aa9.1□□□□□ -0.95
TRIM39-207ENST00000428404 TMEM189A5PLL7 270 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms