RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 PFN1P07737 140 aaKnown RBP11.42□□□□□ -0.58
CLK3P2-201ENST00000427566 CXCL1P09341 107 aa11.42□□□□□ -0.58
CLK3P2-201ENST00000427566 RPL35P42766 123 aaKnown RBP11.42□□□□□ -0.58
CLK3P2-201ENST00000427566 CNN1P51911 297 aaKnown RBP11.42□□□□□ -0.58
CLK3P2-201ENST00000427566 PYGO2Q9BRQ0 406 aa11.42□□□□□ -0.58
CLK3P2-201ENST00000427566 ZNF253O75346 499 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 TAS2R60P59551 318 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 AMTNQ6UX39 209 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 OCC1Q8TAD7 63 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 FAM210BQ96KR6 192 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 IMMP2LQ96T52 175 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 XCL2Q9UBD3 114 aa11.41□□□□□ -0.58
CLK3P2-201ENST00000427566 TGIF2-C20orf24A0A0A6YYL0 155 aa11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 A8MTW9 85 aa11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 HIST1H1AQ02539 215 aaPredicted RBP11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 PDE6HQ13956 83 aa11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 OR8A1Q8NGG7 326 aa11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 SFRP2Q96HF1 295 aa11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 BTF3L4Q96K17 158 aa11.4□□□□□ -0.58
CLK3P2-201ENST00000427566 DNAH7Q8WXX0 4024 aa11.4□□□□□ -0.59
CLK3P2-201ENST00000427566 DEFB4AO15263 64 aa11.39□□□□□ -0.59
CLK3P2-201ENST00000427566 GNG4P50150 75 aa11.39□□□□□ -0.59
CLK3P2-201ENST00000427566 PSG9Q00887 426 aa11.39□□□□□ -0.59
CLK3P2-201ENST00000427566 KCNIP4Q6PIL6 250 aa11.39□□□□□ -0.59
CLK3P2-201ENST00000427566 PEX7O00628 323 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 RANP62826 216 aaKnown RBP11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 CENPWQ5EE01 88 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 OR10G8Q8NGN5 311 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 CLUHP3Q96NS8 147 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 PGPEP1LA6NFU8 196 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 M0R2Z0 102 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 S100A9P06702 114 aaKnown RBP11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 ZFP82Q8N141 532 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 C1QTNF4Q9BXJ3 329 aa11.38□□□□□ -0.59
CLK3P2-201ENST00000427566 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
CLK3P2-201ENST00000427566 SPINK13Q1W4C9 94 aa11.37□□□□□ -0.59
CLK3P2-201ENST00000427566 C5orf17Q8NAS9 161 aa11.37□□□□□ -0.59
CLK3P2-201ENST00000427566 IGF2BP2-AS1Q96M15 143 aa11.37□□□□□ -0.59
CLK3P2-201ENST00000427566 Q9H3A6 140 aa11.37□□□□□ -0.59
CLK3P2-201ENST00000427566 EPDR1Q9UM22 224 aa11.37□□□□□ -0.59
CLK3P2-201ENST00000427566 TRAV9-1A0A075B6T8 112 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 PGPA6NDG6 321 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 K7EN84 100 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 GCGP01275 180 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 S100A6P06703 90 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 ERCC8Q13216 396 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 KIR3DS1Q14943 382 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 LYPD1Q8N2G4 141 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 SMIM12Q96EX1 92 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 AAMDCQ9H7C9 122 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 OTORQ9NRC9 128 aa11.36□□□□□ -0.59
CLK3P2-201ENST00000427566 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 CRXO43186 299 aaPredicted RBP11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 TYMSP04818 313 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 TMEM183BQ1AE95 376 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 MRPL53Q96EL3 112 aaKnown RBP11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 ATG101Q9BSB4 218 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 OSTCQ9NRP0 149 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 KLF12Q9Y4X4 402 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 X6R8D5 127 aa11.35□□□□□ -0.59
CLK3P2-201ENST00000427566 IGLV2-8P01709 118 aa11.34□□□□□ -0.59
CLK3P2-201ENST00000427566 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
CLK3P2-201ENST00000427566 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
CLK3P2-201ENST00000427566 C11orf45Q8TAV5 145 aa11.34□□□□□ -0.59
CLK3P2-201ENST00000427566 IGHV4-28A0A0C4DH34 117 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 A0A1W2PPQ1 181 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 C5orf52A6NGY3 159 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 NPIPB6E9PJ23 425 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 CT45A10P0DMU9 189 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 FAM3BP58499 235 aaPredicted RBP11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 NANOS2P60321 138 aaKnown RBP11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 VGLL1Q99990 258 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 AGPAT4-IT1Q9H0P7 198 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 C11orf68Q9H3H3 251 aaKnown RBP11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 IL36BQ9NZH7 164 aa11.33□□□□□ -0.6
CLK3P2-201ENST00000427566 TRGC2P03986 189 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 PRM2P04554 102 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 RBMY1A1P0DJD3 496 aaKnown RBP11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 RBMY1CP0DJD4 496 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 MIFP14174 115 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 ERVFC1-1P60608 527 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 UBE2G1P62253 170 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 RBMY1FQ15415 496 aaKnown RBP11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 BAGE2Q86Y30 109 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 Q8NAQ8 132 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 PPP1R14DQ9NXH3 145 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 NUPR2A6NF83 97 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 J3KRW8 73 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 TCRAP04437 139 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 ZNF705AQ6ZN79 300 aaPredicted RBP11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms