RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 ATG101Q9BSB4 218 aa17.98■□□□□ 0.47
HERPUD2-205ENST00000427455 KLK5Q9Y337 293 aaPredicted RBP17.98■□□□□ 0.47
HERPUD2-205ENST00000427455 PLAC8L1A1L4L8 177 aa17.97■□□□□ 0.47
HERPUD2-205ENST00000427455 H2AFB1P0C5Y9 115 aa17.97■□□□□ 0.47
HERPUD2-205ENST00000427455 CCDC28AQ8IWP9 274 aa17.97■□□□□ 0.47
HERPUD2-205ENST00000427455 CYB561D1Q8N8Q1 229 aa17.97■□□□□ 0.47
HERPUD2-205ENST00000427455 ARL2-SNX15V9GYD0 113 aa17.97■□□□□ 0.47
HERPUD2-205ENST00000427455 LYRM9A8MSI8 78 aa17.96■□□□□ 0.47
HERPUD2-205ENST00000427455 ZNF767PQ75MW2 155 aa17.96■□□□□ 0.47
HERPUD2-205ENST00000427455 LINC00467Q9BRT7 94 aa17.96■□□□□ 0.47
HERPUD2-205ENST00000427455 IFNA7P01567 189 aa17.95■□□□□ 0.46
HERPUD2-205ENST00000427455 TRAV10A0A0B4J240 114 aa17.94■□□□□ 0.46
HERPUD2-205ENST00000427455 A0A1B0GV50 99 aa17.94■□□□□ 0.46
HERPUD2-205ENST00000427455 FBLL1A6NHQ2 334 aaKnown RBP17.94■□□□□ 0.46
HERPUD2-205ENST00000427455 SULT1A2P50226 295 aa17.94■□□□□ 0.46
HERPUD2-205ENST00000427455 TMEM75Q8N9X5 138 aa17.94■□□□□ 0.46
HERPUD2-205ENST00000427455 NDFIP1Q9BT67 221 aa17.94■□□□□ 0.46
HERPUD2-205ENST00000427455 Q6AWC8 147 aa17.93■□□□□ 0.46
HERPUD2-205ENST00000427455 EIF4E3Q8N5X7 224 aaKnown RBP17.93■□□□□ 0.46
HERPUD2-205ENST00000427455 HIST1H2BAQ96A08 127 aa17.93■□□□□ 0.46
HERPUD2-205ENST00000427455 SGK494Q96LW2 274 aa17.93■□□□□ 0.46
HERPUD2-205ENST00000427455 TCEAL7Q9BRU2 100 aa17.93■□□□□ 0.46
HERPUD2-205ENST00000427455 TREM1Q9NP99 234 aa17.93■□□□□ 0.46
HERPUD2-205ENST00000427455 TIMM8BQ9Y5J9 83 aaPredicted RBP17.93■□□□□ 0.46
HERPUD2-205ENST00000427455 PEX7O00628 323 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 RGS13O14921 159 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 PPT1P50897 306 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 FLI1Q01543 452 aaPredicted RBP17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 CST9LP1Q5W188 147 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 ZNF680Q8NEM1 530 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 C2CD4CQ8TF44 421 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 TVP23CQ96ET8 276 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 PSG8Q9UQ74 426 aa17.92■□□□□ 0.46
HERPUD2-205ENST00000427455 IGLV2-11P01706 119 aa17.91■□□□□ 0.46
HERPUD2-205ENST00000427455 NKX2-5P52952 324 aaPredicted RBP17.91■□□□□ 0.46
HERPUD2-205ENST00000427455 DAD1P61803 113 aa17.91■□□□□ 0.46
HERPUD2-205ENST00000427455 ANXA2RQ3ZCQ2 193 aa17.91■□□□□ 0.46
HERPUD2-205ENST00000427455 LYSTQ99698 3801 aa17.91■□□□□ 0.46
HERPUD2-205ENST00000427455 IGHV1OR15-1A0A075B7D0 117 aa17.9■□□□□ 0.46
HERPUD2-205ENST00000427455 TRAV1-1A0A0B4J248 108 aa17.9■□□□□ 0.46
HERPUD2-205ENST00000427455 CBY3A6NI87 242 aa17.9■□□□□ 0.46
HERPUD2-205ENST00000427455 PAGE4O60829 102 aa17.9■□□□□ 0.46
HERPUD2-205ENST00000427455 Q6ZQT7 251 aa17.9■□□□□ 0.46
HERPUD2-205ENST00000427455 DEFB131BA0A096LNP1 70 aa17.89■□□□□ 0.45
HERPUD2-205ENST00000427455 SNURFLB1AK76 121 aa17.89■□□□□ 0.45
HERPUD2-205ENST00000427455 F6UZH7 168 aa17.89■□□□□ 0.45
HERPUD2-205ENST00000427455 TEX46H3BTG2 121 aa17.89■□□□□ 0.45
HERPUD2-205ENST00000427455 NOP10Q9NPE3 64 aaKnown RBP17.89■□□□□ 0.45
HERPUD2-205ENST00000427455 ALMS1Q8TCU4 4167 aa17.89■□□□□ 0.45
HERPUD2-205ENST00000427455 SACSQ9NZJ4 4579 aa17.88■□□□□ 0.45
HERPUD2-205ENST00000427455 ATP5G3P48201 142 aa17.88■□□□□ 0.45
HERPUD2-205ENST00000427455 PRNTQ86SH4 94 aa17.88■□□□□ 0.45
HERPUD2-205ENST00000427455 TRAV21A0A0B4J279 112 aa17.87■□□□□ 0.45
HERPUD2-205ENST00000427455 LINC00479Q96M42 142 aa17.87■□□□□ 0.45
HERPUD2-205ENST00000427455 TRAV34A0A0B4J273 112 aa17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 DEFB130BP0DP73 79 aa17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 DEFB130AP0DP74 79 aa17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 DAZ2Q13117 558 aaKnown RBP17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 SAPCD1Q5SSQ6 148 aa17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 IBA57Q5T440 356 aaKnown RBP17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 C11orf72Q8NBR9 251 aa17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 MANBALQ9NQG1 85 aa17.86■□□□□ 0.45
HERPUD2-205ENST00000427455 LCE6AA0A183 80 aa17.85■□□□□ 0.45
HERPUD2-205ENST00000427455 MUC21Q5SSG8 566 aa17.85■□□□□ 0.45
HERPUD2-205ENST00000427455 FAM159AQ6UWV7 190 aa17.85■□□□□ 0.45
HERPUD2-205ENST00000427455 Q86TA4 180 aa17.85■□□□□ 0.45
HERPUD2-205ENST00000427455 C8orf49Q96NF6 230 aa17.85■□□□□ 0.45
HERPUD2-205ENST00000427455 GSN-AS1Q9NRJ2 163 aa17.85■□□□□ 0.45
HERPUD2-205ENST00000427455 DNAH1Q9P2D7 4330 aa17.84■□□□□ 0.45
HERPUD2-205ENST00000427455 IGLL5B9A064 214 aa17.84■□□□□ 0.45
HERPUD2-205ENST00000427455 TCTAP57738 103 aa17.84■□□□□ 0.45
HERPUD2-205ENST00000427455 SMUG1Q53HV7 270 aa17.84■□□□□ 0.45
HERPUD2-205ENST00000427455 FMC1Q96HJ9 113 aa17.84■□□□□ 0.45
HERPUD2-205ENST00000427455 TP53TG3Q9ULZ0 132 aa17.84■□□□□ 0.45
HERPUD2-205ENST00000427455 GCGP01275 180 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 TCL1AP56279 114 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 CCL20P78556 96 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 TDRG1Q3Y452 100 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 ALKAL2Q6UX46 152 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 LINC00612Q8N6U2 182 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 GNG13Q9P2W3 67 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 NAGKQ9UJ70 344 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 BOLA1Q9Y3E2 137 aa17.83■□□□□ 0.44
HERPUD2-205ENST00000427455 HTN3P15516 51 aa17.82■□□□□ 0.44
HERPUD2-205ENST00000427455 AKR1C3P42330 323 aa17.82■□□□□ 0.44
HERPUD2-205ENST00000427455 UBE2G1P62253 170 aa17.82■□□□□ 0.44
HERPUD2-205ENST00000427455 ZNF415Q09FC8 603 aa17.82■□□□□ 0.44
HERPUD2-205ENST00000427455 KLF12Q9Y4X4 402 aa17.82■□□□□ 0.44
HERPUD2-205ENST00000427455 TRGV11A0A075B6L2 103 aa17.81■□□□□ 0.44
HERPUD2-205ENST00000427455 IGHV4-4A0A075B6R2 117 aa17.8■□□□□ 0.44
HERPUD2-205ENST00000427455 TRBV6-1A0A0K0K1D8 114 aa17.8■□□□□ 0.44
HERPUD2-205ENST00000427455 PFN1P07737 140 aaKnown RBP17.8■□□□□ 0.44
HERPUD2-205ENST00000427455 ZNF80P51504 273 aaPredicted RBP17.8■□□□□ 0.44
HERPUD2-205ENST00000427455 RYR3Q15413 4870 aa17.8■□□□□ 0.44
HERPUD2-205ENST00000427455 SCO2A0A1W2PP80 73 aa17.79■□□□□ 0.44
HERPUD2-205ENST00000427455 ATP5G1P05496 136 aa17.79■□□□□ 0.44
HERPUD2-205ENST00000427455 TMEM183BQ1AE95 376 aa17.79■□□□□ 0.44
HERPUD2-205ENST00000427455 TMEM183AQ8IXX5 376 aa17.79■□□□□ 0.44
HERPUD2-205ENST00000427455 KCNS1Q96KK3 526 aa17.79■□□□□ 0.44
HERPUD2-205ENST00000427455 FAM210BQ96KR6 192 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms