RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 RPL7L1Q6DKI1 246 aaKnown RBP12.78□□□□□ -0.36
SMARCAL1-205ENST00000425815 OR2T35Q8NGX2 323 aa12.78□□□□□ -0.36
SMARCAL1-205ENST00000425815 RAB24Q969Q5 203 aa12.78□□□□□ -0.36
SMARCAL1-205ENST00000425815 TMPRSS5Q9H3S3 457 aa12.78□□□□□ -0.36
SMARCAL1-205ENST00000425815 TRAV26-1A0A087WT03 109 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 FXYD6-FXYD2A0A087WZ82 144 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 RGS13O14921 159 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 CDC34P49427 236 aaPredicted RBP12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 TCL1AP56279 114 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 SERF2P84101 59 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 SSX7Q7RTT5 188 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 ARL6IP6Q8N6S5 226 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 TVP23CQ96ET8 276 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 C18orf15Q96N68 181 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.37
SMARCAL1-205ENST00000425815 A0A0J9YY99 117 aa12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 GNG5P63218 68 aa12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 Q6AWC8 147 aa12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 GOLT1AQ6ZVE7 132 aa12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 INO80EQ8NBZ0 244 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 ZNRF2Q8NHG8 242 aa12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 LINC00588Q9Y4M8 146 aa12.76□□□□□ -0.37
SMARCAL1-205ENST00000425815 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 TRAV8-1A0A0A6YYK1 113 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 MBP02144 154 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 GCHFRP30047 84 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 FAM3BP58499 235 aaPredicted RBP12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 MUC21Q5SSG8 566 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 MDFICQ9P1T7 246 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
SMARCAL1-205ENST00000425815 PKD1P98161 4303 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 A0A1B0GVY2 172 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 ZNF726P1Q15940 193 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 LINC00336Q6ZUF6 198 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 GNPNAT1Q96EK6 184 aaPredicted RBP12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 VSIG2Q96IQ7 327 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 ST6GAL2Q96JF0 529 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 CYTL1Q9NRR1 136 aa12.74□□□□□ -0.37
SMARCAL1-205ENST00000425815 TRGV2A0A075B6R0 118 aa12.73□□□□□ -0.37
SMARCAL1-205ENST00000425815 H3BNG1 76 aa12.72□□□□□ -0.37
SMARCAL1-205ENST00000425815 SMLR1H3BR10 107 aa12.72□□□□□ -0.37
SMARCAL1-205ENST00000425815 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
SMARCAL1-205ENST00000425815 ACTR3CQ9C0K3 210 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-205ENST00000425815 MRPL16Q9NX20 251 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-205ENST00000425815 HERC2O95714 4834 aa12.72□□□□□ -0.37
SMARCAL1-205ENST00000425815 DYNC1H1Q14204 4646 aaKnown RBP12.71□□□□□ -0.37
SMARCAL1-205ENST00000425815 CCL18P55774 89 aa12.71□□□□□ -0.37
SMARCAL1-205ENST00000425815 ESRGQ1W209 222 aa12.71□□□□□ -0.37
SMARCAL1-205ENST00000425815 ARPC5LQ9BPX5 153 aa12.71□□□□□ -0.37
SMARCAL1-205ENST00000425815 NACAE9PAV3 2078 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 BORCS7-ASMTA0A0B4J1R7 106 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 PRSS29PA6NIE9 313 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 GGTLC3B5MD39 225 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 GNRH2O43555 120 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 CXorf1O96002 111 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 IGLV2-11P01706 119 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 TCRAP04437 139 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 TDRG1Q3Y452 100 aa12.7□□□□□ -0.38
SMARCAL1-205ENST00000425815 A0A096LPF7 62 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 F6UZH7 168 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 ARPC5O15511 151 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 IGHV3-53P01767 116 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 TREM1Q9NP99 234 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 DNAH11Q96DT5 4516 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 KIAA1109Q2LD37 5005 aa12.69□□□□□ -0.38
SMARCAL1-205ENST00000425815 NBDYA0A0U1RRE5 68 aa12.68□□□□□ -0.38
SMARCAL1-205ENST00000425815 ZNF80P51504 273 aaPredicted RBP12.68□□□□□ -0.38
SMARCAL1-205ENST00000425815 ZNF415Q09FC8 603 aa12.68□□□□□ -0.38
SMARCAL1-205ENST00000425815 FHL2Q14192 279 aa12.68□□□□□ -0.38
SMARCAL1-205ENST00000425815 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
SMARCAL1-205ENST00000425815 TMEM167BQ9NRX6 74 aa12.68□□□□□ -0.38
SMARCAL1-205ENST00000425815 TRAV21A0A0B4J279 112 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 IGHV3-16A0A0C4DH30 117 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 TAAR5O14804 337 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 OR11H4Q8NGC9 324 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 RASL10AQ92737 203 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 C8orf49Q96NF6 230 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 Q9H8V8 135 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 PSG8Q9UQ74 426 aa12.67□□□□□ -0.38
SMARCAL1-205ENST00000425815 TRGV11A0A075B6L2 103 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 CTXND1A0A1B0GTU2 59 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 SERTM2A0A1B0GWG4 89 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 C1orf134Q5TEV5 83 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 SPXQ9BT56 116 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 NAGKQ9UJ70 344 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 PKHD1P08F94 4074 aa12.66□□□□□ -0.38
SMARCAL1-205ENST00000425815 A0A1W2PRE2 83 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms