RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 GGTLC3B5MD39 225 aa15.78■□□□□ 0.12
PTCHD3P2-201ENST00000424937 ATP5G1P05496 136 aa15.78■□□□□ 0.12
PTCHD3P2-201ENST00000424937 ATP5G3P48201 142 aa15.78■□□□□ 0.12
PTCHD3P2-201ENST00000424937 TMEM88Q6PEY1 159 aa15.78■□□□□ 0.12
PTCHD3P2-201ENST00000424937 IGHV1OR15-1A0A075B7D0 117 aa15.77■□□□□ 0.12
PTCHD3P2-201ENST00000424937 F5H768 121 aa15.77■□□□□ 0.12
PTCHD3P2-201ENST00000424937 ANXA2RQ3ZCQ2 193 aa15.77■□□□□ 0.12
PTCHD3P2-201ENST00000424937 Q6ZNX1 250 aa15.77■□□□□ 0.12
PTCHD3P2-201ENST00000424937 TMPRSS5Q9H3S3 457 aa15.77■□□□□ 0.12
PTCHD3P2-201ENST00000424937 GSN-AS1Q9NRJ2 163 aa15.77■□□□□ 0.12
PTCHD3P2-201ENST00000424937 VPS13DQ5THJ4 4388 aa15.77■□□□□ 0.11
PTCHD3P2-201ENST00000424937 SERTM2A0A1B0GWG4 89 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 GAGE12BA1L429 117 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 MAP1LC3B2A6NCE7 125 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 PFDN1O60925 122 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 GAGE7O76087 117 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TCRAP04437 139 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 GAGE12FP0CL80 117 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 GAGE12GP0CL81 117 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 GAGE12IP0CL82 117 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 SUMO1P63165 101 aaKnown RBP15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 C11orf72Q8NBR9 251 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 SGK494Q96LW2 274 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 MAP1LC3BQ9GZQ8 125 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TP53TG3Q9ULZ0 132 aa15.76■□□□□ 0.11
PTCHD3P2-201ENST00000424937 F6UZH7 168 aa15.75■□□□□ 0.11
PTCHD3P2-201ENST00000424937 K7EQM0 130 aa15.75■□□□□ 0.11
PTCHD3P2-201ENST00000424937 UBE2G2P60604 165 aa15.75■□□□□ 0.11
PTCHD3P2-201ENST00000424937 DAZ2Q13117 558 aaKnown RBP15.75■□□□□ 0.11
PTCHD3P2-201ENST00000424937 MUC21Q5SSG8 566 aa15.75■□□□□ 0.11
PTCHD3P2-201ENST00000424937 Q6AWC8 147 aa15.75■□□□□ 0.11
PTCHD3P2-201ENST00000424937 LINC00612Q8N6U2 182 aa15.75■□□□□ 0.11
PTCHD3P2-201ENST00000424937 KMT2AQ03164 3969 aa15.74■□□□□ 0.11
PTCHD3P2-201ENST00000424937 A0A1W2PRE2 83 aa15.74■□□□□ 0.11
PTCHD3P2-201ENST00000424937 SEC11BP0C7V7 166 aa15.74■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TMUB2Q71RG4 321 aa15.74■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TREM1Q9NP99 234 aa15.74■□□□□ 0.11
PTCHD3P2-201ENST00000424937 hCG_2014768A0A024R1R8 64 aa15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 FHITP49789 147 aa15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 IBA57Q5T440 356 aaKnown RBP15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 Q6ZTI0 123 aa15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TCTE3Q8IZS6 198 aa15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TVP23CQ96ET8 276 aa15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 NDFIP1Q9BT67 221 aa15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 EPDR1Q9UM22 224 aa15.73■□□□□ 0.11
PTCHD3P2-201ENST00000424937 P0DMU3 169 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 FAM231AP0DMU4 169 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 FAM231CP0DMU5 169 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TCL1AP56279 114 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 EIF5AP63241 154 aaKnown RBP15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 CYB561D1Q8N8Q1 229 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 ATG101Q9BSB4 218 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 NAGKQ9UJ70 344 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 KLF12Q9Y4X4 402 aa15.72■□□□□ 0.11
PTCHD3P2-201ENST00000424937 TRGV1A0A0A0MS02 117 aa15.71■□□□□ 0.11
PTCHD3P2-201ENST00000424937 IFNA7P01567 189 aa15.71■□□□□ 0.11
PTCHD3P2-201ENST00000424937 ZNF415Q09FC8 603 aa15.71■□□□□ 0.11
PTCHD3P2-201ENST00000424937 STOML3Q8TAV4 291 aa15.71■□□□□ 0.11
PTCHD3P2-201ENST00000424937 FAM213BQ8TBF2 198 aa15.71■□□□□ 0.11
PTCHD3P2-201ENST00000424937 DNAH6Q9C0G6 4158 aa15.71■□□□□ 0.11
PTCHD3P2-201ENST00000424937 FAM74A7A6NL05 159 aa15.7■□□□□ 0.1
PTCHD3P2-201ENST00000424937 UMAD1C9J7I0 102 aa15.7■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TPT1P13693 172 aaKnown RBP15.7■□□□□ 0.1
PTCHD3P2-201ENST00000424937 FAM159AQ6UWV7 190 aa15.7■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TMEM75Q8N9X5 138 aa15.7■□□□□ 0.1
PTCHD3P2-201ENST00000424937 C15orf53Q8NAA6 179 aa15.7■□□□□ 0.1
PTCHD3P2-201ENST00000424937 PSG8Q9UQ74 426 aa15.7■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TRAV21A0A0B4J279 112 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 FLI1Q01543 452 aaPredicted RBP15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TMEM183BQ1AE95 376 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 PRNTQ86SH4 94 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 UBE2DNLQ8IWF7 75 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TMEM183AQ8IXX5 376 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 C8orf49Q96NF6 230 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 NACAE9PAV3 2078 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 MUC4Q99102 2169 aa15.69■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TRGV2A0A075B6R0 118 aa15.68■□□□□ 0.1
PTCHD3P2-201ENST00000424937 SPINK4O60575 86 aa15.68■□□□□ 0.1
PTCHD3P2-201ENST00000424937 IGLV2-11P01706 119 aa15.68■□□□□ 0.1
PTCHD3P2-201ENST00000424937 OR5I1Q13606 314 aa15.68■□□□□ 0.1
PTCHD3P2-201ENST00000424937 MRPL16Q9NX20 251 aaKnown RBP15.68■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TRGV11A0A075B6L2 103 aa15.67■□□□□ 0.1
PTCHD3P2-201ENST00000424937 PEX7O00628 323 aa15.67■□□□□ 0.1
PTCHD3P2-201ENST00000424937 ZFP69Q49AA0 526 aa15.67■□□□□ 0.1
PTCHD3P2-201ENST00000424937 AKAP14Q86UN6 197 aa15.67■□□□□ 0.1
PTCHD3P2-201ENST00000424937 POM121L12Q8N7R1 296 aa15.67■□□□□ 0.1
PTCHD3P2-201ENST00000424937 NKX6-2Q9C056 277 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TRAV34A0A0B4J273 112 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 A0A1B0GV50 99 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 FBLL1A6NHQ2 334 aaKnown RBP15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 NUDT3O95989 172 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 C1QBP02746 253 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 HOXA5P20719 270 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 PPT1P50897 306 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 LGALSLQ3ZCW2 172 aaPredicted RBP15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 DPPA3Q6W0C5 159 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 SFT2D1Q8WV19 159 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 LINC00479Q96M42 142 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 MDFICQ9P1T7 246 aa15.66■□□□□ 0.1
PTCHD3P2-201ENST00000424937 TRAV26-1A0A087WT03 109 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms