RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 SSX7Q7RTT5 188 aa13.23□□□□□ -0.29
PRNP-202ENST00000424424 ZNF471Q9BX82 626 aaPredicted RBP13.23□□□□□ -0.29
PRNP-202ENST00000424424 HYDINQ4G0P3 5121 aa13.23□□□□□ -0.29
PRNP-202ENST00000424424 ALMS1Q8TCU4 4167 aa13.23□□□□□ -0.29
PRNP-202ENST00000424424 PLECQ15149 4684 aaKnown RBP13.22□□□□□ -0.29
PRNP-202ENST00000424424 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 A0A1W2PRE2 83 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 F5H768 121 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 BCL2L11O43521 198 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 P0DMU3 169 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 FAM231AP0DMU4 169 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 FAM231CP0DMU5 169 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 GNG5P63218 68 aa13.22□□□□□ -0.29
PRNP-202ENST00000424424 PFDN1O60925 122 aa13.21□□□□□ -0.29
PRNP-202ENST00000424424 TCRAP04437 139 aa13.21□□□□□ -0.29
PRNP-202ENST00000424424 SEC11BP0C7V7 166 aa13.21□□□□□ -0.29
PRNP-202ENST00000424424 DAZ2Q13117 558 aaKnown RBP13.21□□□□□ -0.29
PRNP-202ENST00000424424 NDFIP1Q9BT67 221 aa13.21□□□□□ -0.29
PRNP-202ENST00000424424 GSN-AS1Q9NRJ2 163 aa13.21□□□□□ -0.29
PRNP-202ENST00000424424 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 GAGE7O76087 117 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
PRNP-202ENST00000424424 IBA57Q5T440 356 aaKnown RBP13.2□□□□□ -0.3
PRNP-202ENST00000424424 Q6AWC8 147 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 Q6ZNX1 250 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 STOML3Q8TAV4 291 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 NKX6-2Q9C056 277 aaPredicted RBP13.2□□□□□ -0.3
PRNP-202ENST00000424424 TREM1Q9NP99 234 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 EPDR1Q9UM22 224 aa13.2□□□□□ -0.3
PRNP-202ENST00000424424 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 MAP1LC3B2A6NCE7 125 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 UMAD1C9J7I0 102 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 FAM159AQ6UWV7 190 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 LINC00612Q8N6U2 182 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 C11orf72Q8NBR9 251 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 MAP1LC3BQ9GZQ8 125 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 TMPRSS5Q9H3S3 457 aa13.19□□□□□ -0.3
PRNP-202ENST00000424424 FBLL1A6NHQ2 334 aaKnown RBP13.18□□□□□ -0.3
PRNP-202ENST00000424424 GGTLC3B5MD39 225 aa13.18□□□□□ -0.3
PRNP-202ENST00000424424 TCL1AP56279 114 aa13.18□□□□□ -0.3
PRNP-202ENST00000424424 UBE2G2P60604 165 aa13.18□□□□□ -0.3
PRNP-202ENST00000424424 MUC21Q5SSG8 566 aa13.18□□□□□ -0.3
PRNP-202ENST00000424424 Q6ZQT7 251 aa13.18□□□□□ -0.3
PRNP-202ENST00000424424 TCTE3Q8IZS6 198 aa13.18□□□□□ -0.3
PRNP-202ENST00000424424 CYB561D1Q8N8Q1 229 aa13.18□□□□□ -0.3
PRNP-202ENST00000424424 TRAV21A0A0B4J279 112 aa13.17□□□□□ -0.3
PRNP-202ENST00000424424 IFNA7P01567 189 aa13.17□□□□□ -0.3
PRNP-202ENST00000424424 TPT1P13693 172 aaKnown RBP13.17□□□□□ -0.3
PRNP-202ENST00000424424 ZNF415Q09FC8 603 aa13.17□□□□□ -0.3
PRNP-202ENST00000424424 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
PRNP-202ENST00000424424 ATG101Q9BSB4 218 aa13.17□□□□□ -0.3
PRNP-202ENST00000424424 TP53TG3Q9ULZ0 132 aa13.17□□□□□ -0.3
PRNP-202ENST00000424424 PSG8Q9UQ74 426 aa13.17□□□□□ -0.3
PRNP-202ENST00000424424 TRGV11A0A075B6L2 103 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 TRGV2A0A075B6R0 118 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 TRGV1A0A0A0MS02 117 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 FLI1Q01543 452 aaPredicted RBP13.16□□□□□ -0.3
PRNP-202ENST00000424424 Q6ZTI0 123 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 POM121L12Q8N7R1 296 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 TMEM75Q8N9X5 138 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 KLF12Q9Y4X4 402 aa13.16□□□□□ -0.3
PRNP-202ENST00000424424 F6UZH7 168 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 PPT1P50897 306 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 OR5I1Q13606 314 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 ZFP69Q49AA0 526 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 TVP23CQ96ET8 276 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 NAGKQ9UJ70 344 aa13.15□□□□□ -0.3
PRNP-202ENST00000424424 FAM74A7A6NL05 159 aa13.14□□□□□ -0.31
PRNP-202ENST00000424424 SPINK4O60575 86 aa13.14□□□□□ -0.31
PRNP-202ENST00000424424 FHITP49789 147 aa13.14□□□□□ -0.31
PRNP-202ENST00000424424 LGALS9BQ3B8N2 356 aa13.14□□□□□ -0.31
PRNP-202ENST00000424424 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
PRNP-202ENST00000424424 PRNTQ86SH4 94 aa13.14□□□□□ -0.31
PRNP-202ENST00000424424 SFT2D1Q8WV19 159 aa13.14□□□□□ -0.31
PRNP-202ENST00000424424 NUDT3O95989 172 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 C1QBP02746 253 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 TMEM183BQ1AE95 376 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 EIF5AL1Q6IS14 154 aaKnown RBP13.13□□□□□ -0.31
PRNP-202ENST00000424424 TMEM183AQ8IXX5 376 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 C18orf15Q96N68 181 aa13.13□□□□□ -0.31
PRNP-202ENST00000424424 hCG_2014768A0A024R1R8 64 aa13.12□□□□□ -0.31
PRNP-202ENST00000424424 PEX7O00628 323 aa13.12□□□□□ -0.31
PRNP-202ENST00000424424 IGLV2-11P01706 119 aa13.12□□□□□ -0.31
PRNP-202ENST00000424424 LGALSLQ3ZCW2 172 aaPredicted RBP13.12□□□□□ -0.31
PRNP-202ENST00000424424 RNF212Q495C1 297 aa13.12□□□□□ -0.31
PRNP-202ENST00000424424 SMUG1Q53HV7 270 aa13.12□□□□□ -0.31
PRNP-202ENST00000424424 AKAP14Q86UN6 197 aa13.12□□□□□ -0.31
PRNP-202ENST00000424424 MBD3L1Q8WWY6 194 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms