RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
DDX56-203ENST00000421223 DUX5Q96PT3 197 aa8.43□□□□□ -1.06
DDX56-203ENST00000421223 ATP6V0BQ99437 205 aa8.43□□□□□ -1.06
DDX56-203ENST00000421223 FBN2P35556 2912 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 NCR2O95944 276 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 IGHV4-59P01825 116 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 TM4SF20Q53R12 229 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 C8orf86Q6ZUL3 223 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 TEX15Q9BXT5 2789 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 D6R8Y8 96 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 SPRY2O43597 315 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 FER1L6-AS1Q8NA97 138 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 ZNF738Q8NE65 137 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
DDX56-203ENST00000421223 PRRC2AP48634 2157 aaKnown RBP8.41□□□□□ -1.06
DDX56-203ENST00000421223 FAM231BA6NCW3 169 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
DDX56-203ENST00000421223 C10orf99Q6UWK7 81 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 OR4X2Q8NGF9 303 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 IGHV1-24A0A0C4DH33 117 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 TMEM8BA6NDV4 472 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 FABP5P3A8MUU1 101 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 TCTAP57738 103 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 FA2HQ7L5A8 372 aa8.41□□□□□ -1.06
DDX56-203ENST00000421223 KRTAP10-9P60411 292 aa8.4□□□□□ -1.06
DDX56-203ENST00000421223 DEFB112Q30KQ8 113 aa8.4□□□□□ -1.06
DDX56-203ENST00000421223 FAM106AQ4KMX7 169 aa8.4□□□□□ -1.06
DDX56-203ENST00000421223 NOTCH3Q9UM47 2321 aa8.4□□□□□ -1.06
DDX56-203ENST00000421223 RPLP1P05386 114 aaKnown RBP8.4□□□□□ -1.06
DDX56-203ENST00000421223 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.06
DDX56-203ENST00000421223 MEGF9Q9H1U4 602 aa8.4□□□□□ -1.06
DDX56-203ENST00000421223 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.07
DDX56-203ENST00000421223 F6UB75 175 aa8.4□□□□□ -1.07
DDX56-203ENST00000421223 IGF1P05019 195 aa8.4□□□□□ -1.07
DDX56-203ENST00000421223 CKS2P33552 79 aa8.4□□□□□ -1.07
DDX56-203ENST00000421223 RAB9AP51151 201 aa8.4□□□□□ -1.07
DDX56-203ENST00000421223 A0A1B0GW15 77 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 EDN2P20800 178 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 Q6ZN92 141 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 ERASQ7Z444 233 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 SPATA12Q7Z6I5 190 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 PRELID3AQ96N28 172 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 SPXQ9BT56 116 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 TMEM70Q9BUB7 260 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 TRAV8-2A0A0B4J237 113 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 A6NDX4 124 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 IGLC3P0DOY3 106 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 FOXE3Q13461 319 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
DDX56-203ENST00000421223 FAM223BA6NKX1 122 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 FAM223AQ8IWN6 122 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 OR8A1Q8NGG7 326 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 MXRA5Q9NR99 2828 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 UFC1Q9Y3C8 167 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 C2orf70A6NJV1 201 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 IGHG2P01859 326 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 EVI2AP22794 236 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 LOXL1Q08397 574 aaPredicted RBP8.38□□□□□ -1.07
DDX56-203ENST00000421223 BOD1L2Q8IYS8 172 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 NPFFR1Q9GZQ6 430 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 ACANP16112 2415 aa8.38□□□□□ -1.07
DDX56-203ENST00000421223 OR4C46A6NHA9 309 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 HIST1H1AQ02539 215 aaPredicted RBP8.37□□□□□ -1.07
DDX56-203ENST00000421223 UQCR10Q9UDW1 63 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 hDV102S1A0JD36 115 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 PPBPP02775 128 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 PTTG1IPP53801 180 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
DDX56-203ENST00000421223 Q6AWC8 147 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 C11orf21Q9P2W6 132 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 NOTCH2Q04721 2471 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 WNK1Q9H4A3 2382 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 GAS8-AS1O95177 125 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 OR5AL1P0C617 328 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
DDX56-203ENST00000421223 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 HIST2H2BDQ6DRA6 164 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 ZNF843Q8N446 348 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 LINC01356Q8N9X3 169 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 RHPN1-AS1Q9BWJ2 59 aa8.37□□□□□ -1.07
DDX56-203ENST00000421223 BEX4Q9NWD9 120 aaPredicted RBP8.37□□□□□ -1.07
DDX56-203ENST00000421223 C20orf202A1L168 122 aa8.36□□□□□ -1.07
DDX56-203ENST00000421223 IGKV3-20P01619 116 aa8.36□□□□□ -1.07
DDX56-203ENST00000421223 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
DDX56-203ENST00000421223 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
DDX56-203ENST00000421223 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
DDX56-203ENST00000421223 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
DDX56-203ENST00000421223 SYS1-DBNDD2H3BUS1 97 aa8.36□□□□□ -1.07
DDX56-203ENST00000421223 HERV-K104P63124 156 aa8.36□□□□□ -1.07
DDX56-203ENST00000421223 IGKV3D-20A0A0C4DH25 116 aa8.35□□□□□ -1.07
DDX56-203ENST00000421223 BRI3O95415 125 aa8.35□□□□□ -1.07
DDX56-203ENST00000421223 NPYP01303 97 aa8.35□□□□□ -1.07
DDX56-203ENST00000421223 IGLL1P15814 213 aa8.35□□□□□ -1.07
DDX56-203ENST00000421223 ID1P41134 155 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms