RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CLEC5AQ9NY25 188 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 PAM16Q9Y3D7 125 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 FAM223BA6NKX1 122 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 FXYD7P58549 80 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 KLK9Q2XQG4 91 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 MAJINQ3KP22 176 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 WFDC3Q8IUB2 231 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 FAM223AQ8IWN6 122 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 PSMG3-AS1Q96PY0 264 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 C11orf21Q9P2W6 132 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 KLK9Q9UKQ9 250 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 SMKR1H3BMG3 65 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 HOXA3O43365 443 aaPredicted RBP6.71□□□□□ -1.34
SNCA-206ENST00000420646 HSBP1O75506 76 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 RPLP1P05386 114 aaKnown RBP6.71□□□□□ -1.34
SNCA-206ENST00000420646 ESDP10768 282 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 PAFAH1B2P68402 229 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 FOXE3Q13461 319 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 AMN1Q8IY45 258 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 WFDC11Q8NEX6 87 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 NOTCH3Q9UM47 2321 aa6.71□□□□□ -1.34
SNCA-206ENST00000420646 COL6A5A8TX70 2615 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 LOC102724200A0A096LPH7 203 aaPredicted RBP6.7□□□□□ -1.34
SNCA-206ENST00000420646 LOC389332A0A1B0GUA5 103 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 FAM181BA6NEQ2 426 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 GAS8-AS1O95177 125 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 DSCR9P59020 149 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 DEFB113Q30KQ7 82 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 FAM106AQ4KMX7 169 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 GFRA4Q9GZZ7 299 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 TRBV6-1A0A0K0K1D8 114 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 M0R143 59 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 DLEU1O43261 78 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 C3orf79P0CE67 100 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 TFPI2P48307 235 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 COX19Q49B96 90 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 RASL11AQ6T310 242 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 U3KQE9 123 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 H0Y8G0 127 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 M0R2Z0 102 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 HAX1O00165 279 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 CRIP2P52943 208 aaPredicted RBP6.7□□□□□ -1.34
SNCA-206ENST00000420646 PRR9Q5T870 116 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 Q8N976 141 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 ZNF738Q8NE65 137 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 OR4B1Q8NGF8 309 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 NPFFR1Q9GZQ6 430 aa6.7□□□□□ -1.34
SNCA-206ENST00000420646 AGRNO00468 2067 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.69□□□□□ -1.34
SNCA-206ENST00000420646 NCR2O95944 276 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 TWIST1Q15672 202 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 SAPCD1Q5SSQ6 148 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 EBLN2Q6P2I7 272 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 C18orf65Q6ZTR6 163 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 SPATA12Q7Z6I5 190 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 CFHR3Q02985 330 aa6.69□□□□□ -1.34
SNCA-206ENST00000420646 A0A087X0K7 114 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 IGKV3D-20A0A0C4DH25 116 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 M0QZK8 103 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 GATA3P23771 443 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 COTL1Q14019 142 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 DEFB136Q30KP8 78 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 KRTAP1-3Q8IUG1 177 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 DUX3Q96PT4 197 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 FAM231BA6NCW3 169 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 D6R8Y8 96 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 PSMB8P28062 276 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 LOXL1Q08397 574 aaPredicted RBP6.68□□□□□ -1.34
SNCA-206ENST00000420646 C1orf194Q5T5A4 169 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
SNCA-206ENST00000420646 NDUFA4O00483 81 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 RIGQ13278 110 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 KLF5Q13887 457 aaPredicted RBP6.67□□□□□ -1.34
SNCA-206ENST00000420646 FER1L6-AS1Q8NA97 138 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 USMG5Q96IX5 58 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 PMCHL2Q9BQD1 86 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 TP73-AS1Q9UF72 201 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 IGHV1-24A0A0C4DH33 117 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 FABP5P3A8MUU1 101 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 GATA1P15976 413 aaPredicted RBP6.67□□□□□ -1.34
SNCA-206ENST00000420646 BORCS7Q96B45 105 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 SLC50A1Q9BRV3 221 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 PEF1Q9UBV8 284 aaKnown RBP6.67□□□□□ -1.34
SNCA-206ENST00000420646 TCF21O43680 179 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 IGKV3-20P01619 116 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 LINC00614P0C842 121 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 HIST1H1AQ02539 215 aaPredicted RBP6.67□□□□□ -1.34
SNCA-206ENST00000420646 C11orf44Q8N8P7 122 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 TMEM190Q8WZ59 177 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 NDFIP1Q9BT67 221 aa6.67□□□□□ -1.34
SNCA-206ENST00000420646 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
SNCA-206ENST00000420646 SYNJ2BPP57105 145 aa6.66□□□□□ -1.34
SNCA-206ENST00000420646 GAGE1Q13065 139 aa6.66□□□□□ -1.34
SNCA-206ENST00000420646 OR10AG1Q8NH19 301 aa6.66□□□□□ -1.34
SNCA-206ENST00000420646 RNASE8Q8TDE3 154 aaKnown RBP6.66□□□□□ -1.34
SNCA-206ENST00000420646 VPREB3Q9UKI3 123 aa6.66□□□□□ -1.34
SNCA-206ENST00000420646 A0A0G2JLM5 398 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms